Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3955 ATGTCTCTTTCGAAAAACAACAGTACTACTCAGATGAATGAAGGTGGAGCAACAACAACAGGAGCACCTTCTTCCTCCTCATCTTCATGGAATAGGCTCCCTCCTATGCCTCCACATAGATTTGATAGCGATGAAGATCTATTCGAAGTTCCAGATGTGGAAGGTACACAATGTCAAAGTAGTGTCCATTCAGAAGGAACAAATCAAAACAGTAGTAACCATAATCAAACCAATGCAACAGATACTCAACTTCAACCTGGCTTCCCCGGAAAACGTCGTCGTGGAAGAAACCCAGTAGATAAAGAATATAGACGACTCAAAAGGTTGCTAAGGAATAGGGTCTCTGCCCAACAAGCTCGTGAAAGAAAAAAAGTGTATGTGAATGACTTAGAATCAAGAGCTAAAGAGATGGAAGATAAGAACTCCAATTTAGAAGAGCGTATCTCAACTTTGATCAATGAAAACACCATGCTCCGAAAGGTTCTTATGAACACTAGACCCAAAGTTGATGAGAGCAATGAACCTTAG 528 0.4072 MSLSKNNSTTQMNEGGATTTGAPSSSSSSWNRLPPMPPHRFDSDEDLFEVPDVEGTQCQSSVHSEGTNQNSSNHNQTNATDTQLQPGFPGKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKEMEDKNSNLEERISTLINENTMLRKVLMNTRPKVDESNEP* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3955 175 CDD bZIP_HY5-like 114 155 - -
Tpr6g3955 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Tpr6g3955 175 Coils Coil 120 161 - -
Tpr6g3955 175 Pfam bZIP transcription factor 101 160 IPR004827 GO:0003700|GO:0006355
Tpr6g3955 175 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Tpr6g3955 175 Gene3D Single helix bin 123 164 - -
Tpr6g3955 175 SUPERFAMILY Leucine zipper domain 103 163 IPR046347 GO:0003700|GO:0006355
Tpr6g3955 175 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 18 174 - -
Tpr6g3955 175 MobiDBLite consensus disorder prediction 1 102 - -
Tpr6g3955 175 MobiDBLite consensus disorder prediction 1 33 - -
Tpr6g3955 175 MobiDBLite consensus disorder prediction 54 85 - -
Tpr6g3955 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
Tpr6g3955 175 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 18 174 IPR044280 GO:0000981|GO:0045944
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3955 83 171 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 76.667 4.32e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr6g3955 bZIP_1 1.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3955 K16241 - gmx:100783826 202.601