Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3931 ATGGCTACTATCGGCGTGCCACCACAAGTTCTTCCTCCCCCGTTAACTTCAACTTCTGAACCACCTCCTCTTTTTGATGGAACCACCAGGTTGTACGTTAATTACAGTTGCCCCTATGCACAACGTACATGGATCGCTAGGAACTACAAGGGTCTACAAGACAAGATCCATTTGGTTCCTATTGACCTTCAAAACAGGCCTGCTTGGTATAAGGAAAAAGTATATCCTGAAAATAAGGTGCCATCTTTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTGATCAAATATATTGATGCTAACTTTGAAGGAACACCTCTCTTTCCTAATGATCCTGCCAAGAAAGAGTTCGGTGAGCAGTTGTTATCCCATGTTGATACATTCACCAAAGAGCTGTACGCTTCATTGAAAGGAGATACTGTGCAACAAGCCAGTCCTACTTTTGAATTCTTGGAGAATGCTCTTGGCAAATTTGATGATGGGCCATTCCTTCTTGGTCAATTCAGTTTGGTGGATGTTGCCTATATTCCATTTGTTGAAAGATTCCATATCGTCCTTGCTGAGGTTTTCAAGCATGACATTACCGAAGGAAGGCCTAAACTCGCAACATGGATCGAGGAGTTGAACAAGATTGATGCTTATACACAGACAAGAGTGAATCCTCAAGAAATTGTTGAACTTTTCAAGAATCGTTTTCTGCCTCAACAGTGA 717 0.4198 MATIGVPPQVLPPPLTSTSEPPPLFDGTTRLYVNYSCPYAQRTWIARNYKGLQDKIHLVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYIDANFEGTPLFPNDPAKKEFGEQLLSHVDTFTKELYASLKGDTVQQASPTFEFLENALGKFDDGPFLLGQFSLVDVAYIPFVERFHIVLAEVFKHDITEGRPKLATWIEELNKIDAYTQTRVNPQEIVELFKNRFLPQQ* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3931 238 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
Tpr6g3931 238 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 237 - -
Tpr6g3931 238 SFLD Main (cytGST) 30 211 - -
Tpr6g3931 238 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 237 IPR044629 GO:0004364
Tpr6g3931 238 Gene3D Glutaredoxin 3 105 - -
Tpr6g3931 238 SFLD Glutathione Transferase (cytosolic) 30 211 IPR040079 -
Tpr6g3931 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Tpr6g3931 238 CDD GST_C_Lambda 113 231 - -
Tpr6g3931 238 SUPERFAMILY Thioredoxin-like 20 109 IPR036249 -
Tpr6g3931 238 Gene3D - 106 237 - -
Tpr6g3931 238 SUPERFAMILY GST C-terminal domain-like 104 234 IPR036282 -
Tpr6g3931 238 Pfam Glutathione S-transferase, C-terminal domain 143 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3931 Tpr-Chr6 44584702 44587959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3931 12 235 Glutathione S-transferase Gene Family AT5G02790 67.411 1.29e-117 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3931 K00799 - gmx:547597 425.631