Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3927 ATGGCTTTCACAGTTTCTCATATTTTCCTTCTAGTCATCTTTCTATTTCCTTTCCAATATTGTTCATGTTATTTAACATCATTGAAAAAGGGTTCATCTCTATCAGTAGAGAAACATGAAAAAGATGTAATTGTCTCTTCAAATGGAATATTCTCTGCTGGCTTCTATCAAATCGGAGAAAATGCATTTTCATTTGCCATATGGTTTACAGAGATGCAGAATCACAGTCATGACCCAGCCAATATTGTTTGGATGGCAAACCGTGAACAACCTGTGAATGGTAAGCTTTCAAAGCTTTTCCTCTTAAACACAGGTAACATCCTCTTGATTGATGCGGACCAACACAACATTTGGTCTTCAAACACAGCATCAGATGCACCATTAGAGTTGTATCTTAAAGAAGATGGTAATCTTGTGTTACGTGAGCTTCAAGGAACTACCATCTTGTGGCAAAGTTATGATTTTCCAACAAATACTCTCCTTCCCAATCAACCTCTCACAAGATACACAAATCTTGTTTCTTCAAGAAGCCAGAGTAATCATTCTTCTGGCTTCTATAAGTTATTCTTTGATGACAACAATGTTATTCGTCTCCACTATAATGGTCCTGATGTTTCGAGTACATATTGGCCTCCACGTTATTTGTTGAGCTGGCAAGCTGGAAGGTTCAATTACAATAGTAGTAGAATTGCTTTGTTGGATTCTTTTGGGAAATTCGTTTCCTCCGATAATTACTCTTTTTCCACATATGATTATAGTATGGTTATGCAAAGAAGATTAACCATGGATTCTGATGGTAATATTCGAGTTTATAGTCGAAAAAACTTGTCAGAAATTTGGTATATTTCATATCAAGTCATAATTGATACTTGCATTATTCATGGAATTTGTGGTGAAAATAGCACTTGTAGCTATGATTCTAAAAAGGGTAAGAAATGCTCTTGTTTGCCGGGGTATAAAGTGACGAACGATAGTGATTGGTCTTATGGCTGCAAACCTATGTTTGATTTTACTTGCAATCGAAGTGAGTCTACCTTTTTAAAATTACAAGGTTACGAGCTCTTCGGTTATGACAATAATTTTGTTCAAAATAGTACCTTCAAAAATTGTGAGAATTTATGTTTACAAGATTGTTATTGTAAAGGATTCCAATACAAATTTGTAGAGGACAAAGGCATCTTCAATTGCTTTACAAAGCTACAATTGTTGAATGGGAGGCATTCACCAAGTTTTCCAGGAGTAACTTACTTAAGACTTCCAAAAAGTAATCACTTCTCTAAAGAAGAGACTATGAGTGTAAAAGATCAGTTTTGTTCGGTGCAGTTTCACAAAGAATTTCCAAGAAAACCAATAAGTCACATGTTAAAGTTTTTTCAATGGCTTGTAATTACAGTTGGTGGTTTAGAATGTGTTTGTTTTCTTTTGGTTTTTGTTTTTTTATTTGCCAACAAAAAGAGTAGTGTAGATAAACATAACTATCATCATGCATTGGGATTTAGAAGATATAGTTACTCTGAGTTGAAGGTAGCAACAAAGAATTTCAGTAATGAGATTGGAAGAGGTGGAGGAGGGGTTGTCTATAAAGGTACATTTCCGGATCAAAGACATGTAGCCGTAAAGAGATTGTATGAAGCTCAACAAGGAGAAGGAGAGTTTCTCGCCGAAGTAAACATCATTGGAAGGCTTAATCACATGAACTTGATTGAAATGTGGGGTTATTGTGTTGAAGGTAAGCATAGAATTTTGGTATATGAGTACATGGAAAATGGTTCTTTAGCTGAAAATTTATCCTCTAATAAACTTGATTGGAGCAAAAGGTATGATATTGCTTTAGGAATTTCTAGAGTGTTAGCTTATCTACATGAAGAATGTTTGGAATGGATTTTGCATTGTGATATAAAGCCACAAAATATACTTCTTGATGCTAACTTTCAACCCAAGTTAGCAGATTTTGGATTGTCTAAACTCCAAAATAGAAACAATCTAAACAATAATTCAGAATTCTCAATGATAAGAGGAACAAGAGGATATATGGCGCCTGAATGGATTTTGAATTTACCAATAACATCTAAAGTAGATGTTTATAGTTATGGGATTGTTGTGTTGGAGATGATAACTGGAAAGAGTTCAACAATGATGAATATAGAAGGAGATGATGGAGAAGTGGCATATAATGGAAGATTGATAACTTGGGTAAGAGAGAAAAAGAGGAGTGCATGTTGGGTGGAAGAAATTATAGATCCTTCAATGGTGAATAATTGTGATTTGAGTAAAATGGAAATTTTGGCTAGAGTTGCTTTGGACTGTGTTGAGGAAGATAGGGATATTAGACCTTCTATGAGTCAAGTGGTTGAAATGCTTCAAAGTCGTGATAGAGAACTCGAGTGA 2388 0.348 MAFTVSHIFLLVIFLFPFQYCSCYLTSLKKGSSLSVEKHEKDVIVSSNGIFSAGFYQIGENAFSFAIWFTEMQNHSHDPANIVWMANREQPVNGKLSKLFLLNTGNILLIDADQHNIWSSNTASDAPLELYLKEDGNLVLRELQGTTILWQSYDFPTNTLLPNQPLTRYTNLVSSRSQSNHSSGFYKLFFDDNNVIRLHYNGPDVSSTYWPPRYLLSWQAGRFNYNSSRIALLDSFGKFVSSDNYSFSTYDYSMVMQRRLTMDSDGNIRVYSRKNLSEIWYISYQVIIDTCIIHGICGENSTCSYDSKKGKKCSCLPGYKVTNDSDWSYGCKPMFDFTCNRSESTFLKLQGYELFGYDNNFVQNSTFKNCENLCLQDCYCKGFQYKFVEDKGIFNCFTKLQLLNGRHSPSFPGVTYLRLPKSNHFSKEETMSVKDQFCSVQFHKEFPRKPISHMLKFFQWLVITVGGLECVCFLLVFVFLFANKKSSVDKHNYHHALGFRRYSYSELKVATKNFSNEIGRGGGGVVYKGTFPDQRHVAVKRLYEAQQGEGEFLAEVNIIGRLNHMNLIEMWGYCVEGKHRILVYEYMENGSLAENLSSNKLDWSKRYDIALGISRVLAYLHEECLEWILHCDIKPQNILLDANFQPKLADFGLSKLQNRNNLNNNSEFSMIRGTRGYMAPEWILNLPITSKVDVYSYGIVVLEMITGKSSTMMNIEGDDGEVAYNGRLITWVREKKRSACWVEEIIDPSMVNNCDLSKMEILARVALDCVEEDRDIRPSMSQVVEMLQSRDRELE* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3927 795 Pfam Protein kinase domain 515 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3927 795 Gene3D Transferase(Phosphotransferase) domain 1 587 795 - -
Tpr6g3927 795 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 792 - -
Tpr6g3927 795 Gene3D Phosphorylase Kinase; domain 1 480 586 - -
Tpr6g3927 795 Pfam PAN-like domain 339 400 IPR003609 -
Tpr6g3927 795 ProSiteProfiles Protein kinase domain profile. 512 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3927 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 211 IPR036426 -
Tpr6g3927 795 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Tpr6g3927 795 PIRSF SRK 1 795 IPR024171 GO:0004674
Tpr6g3927 795 Gene3D - 20 155 IPR036426 -
Tpr6g3927 795 ProSiteProfiles Bulb-type lectin domain profile. 19 153 IPR001480 -
Tpr6g3927 795 Pfam S-locus glycoprotein domain 238 321 IPR000858 GO:0048544
Tpr6g3927 795 CDD B_lectin 44 156 IPR001480 -
Tpr6g3927 795 CDD PAN_AP_plant 340 420 - -
Tpr6g3927 795 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 792 - -
Tpr6g3927 795 SUPERFAMILY Protein kinase-like (PK-like) 495 788 IPR011009 -
Tpr6g3927 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Tpr6g3927 795 SMART blect_4 35 156 IPR001480 -
Tpr6g3927 795 CDD STKc_IRAK 518 788 - -
Tpr6g3927 795 ProSiteProfiles PAN/Apple domain profile. 339 423 IPR003609 -
Tpr6g3927 795 Pfam D-mannose binding lectin 82 168 IPR001480 -
Tpr6g3927 795 SMART serkin_6 512 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3927 Tpr-Chr6 44543255 44547115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3927 461 794 Receptor kinase-like Gene Family AT1G56120 38.551 1.73e-62 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr6g3927 Pkinase 9.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3927 - - gmx:100784287 1122.46