Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3926 ATGGCTTTCACAGTTTCTCATATTTTCCTTCTAGTCATCTTTCTATTTCCTTTCCAATATTGTTCATGTTATTTAACATCATTGAAAAAGGGTTCATCTCTATCAGTAGAGAAACATGAAAAAGATGTAATTGTCTCTTCAAATGGAATATTCTCTGCTGGGTTCTATCAAATTGGAGAAAATGCATTTTCATTCGCCATATGGTTCACGGAGCTTCAGAATCACAGTCACAACCCAGCCAATATTGTATGGATGGCAAACCGGGAACAACTTGTGAATGGTAAGCATTCAAAGCTTTTCATCTTAAACACAGGTAACATGCTTTTGCTCGATGCGGGTCAACACAACACTTGGTCTTCAAATACAGCATCAAATGCACACTTAGAGTTGTATCTTAAAGAAGATGGTAATCTTGTGTTACGTGAGCTTCAAGGAACTACCATCTTATGGCAAAGCTTTGATTTTCCAACAAATACTCTCCTTCCTAATCAACCTCTCACCAGACACACAAATCTTGTTTCTTCAAGAAGCCTGAGTAATCATTCTTCTGGCTTTTATAAGTTGTTCTTTGATGATAACAATGTTCTTCGTCTCGATTATGATGGTCCTGATGTTTCCAGTACATATTGGCCTCCATCTTGGTTATCAGCATGGCAAGCTGGAAGGTCCAATTACAATAGTAGTAGAATTGCATTGTTGGATTCTCTTGGAAAGTTCATTTCATCTGATAATTACATTTTTTCCACATATGATTATGGAATTCATATGCAAAGAAGACTGACCATGGATTTTGATGGTAATATTCGAGTTTACAGTCGAAAAAACGTGTCAGATAATTGGCACGTTTCATGGCAAGTCATATCTGATACTTGCATCATTCATGGAATTTGTGGTGCAAATAGCACTTGCAGCTATGATCCTAAAAAGGGTATGAAATGCTCTTGTTTGCCCGGATACAAAATGAAGAACCATAGTGATTGGTCTTATGGTTGTGAACCTGTGTTTGATTTTACTTGCAATAGAAGTGAATCTACCTTTTTAAAATTAAAAGGGTTTGAGCTTTATGGATATGATAGTAATTTTGTTCAAAATAGTACCTACAAAAGTTGTGAGAATTTATGTTTACAACATTGTAACTGTACAGCATTTCAATACACATATCCAGAGGGCAGTAACATCTTCCAATGCTATACAAAGCTACAATTGTTGAATGGGAGGTATTCACCAAGTTTTCAAGGAATAACTTACATAAGAATTCCAAAAGGTAATAACTTCCATAAAGAAGAGTCTGTGAGTGTAAACAATGATGTTTGTTTAGTGCAACTTCATAGAGACTATGCCACAAAACCAACAAGTAGTATGGTGAAGTTTTTTCTGTGGCTTTCAATTACAGTTGGTGGTTTAGAAGTTGTTTGCTTTTTTGTGGTTTTTGTTTTTTTAAATAAGACCAACAAAAAGTCTAATGCAAATCCACAAAACACTTATCATGCATTGTTGGGATTTAGAAGATATAGTTACTCTGAATTGAAGGTAGCAACAAAGAATTTCAGTAATGAGATTGGAAGAGGTGGAGGAGGAGTTGTATATAGTGGTACATTGCCGGATCAAAGACATGCAGCAATAAAGAGATTGAATGAAGCTAAACAAGGAGAAGGAGAGTTTCTTGCTGAAGTTAGCATCATTGGAAGGCTTAATCATATGAACTTGATTGAAATGTGGGGTTATTGTGTTGAAGGTAAGCACAGACTCTTGGTATATGAGTACATGAAAAATGGTTCTTTAGCTGAAAACCTTTCATCTAAAACTAATATCCTTGATTGGAGTAAGAGGTATGATATTGCTTTAGGAACATCTAGAGTTCTAGCTTATCTACATGAAGAATGTTTGGAATGGATTTTGCATTGTGATATAAAGCCACAAAATATACTTCTTGATTCTAACTTTCAACCCAAGTTAGCAGATTTTGGACTGTCTAAGCTGAAAAATAGAAACAATATGAATAATAATTCAGAATTTTCAATGATTAGAGGAACAAGAGGATACATGGCGCCCGAGTGGATTTTCAATTTACCAATAACATCTAAAGTGGATGTTTATAGTTATGGGGTTGTTTTGTTGGAGATGATAACTGGAAAGAGTTCAACAATGATGAATATAGAAGGAGATAATGCAGAAGTGGCCTATAATGGAAGGTTGATAACTTGGGTAAGAGAGAAAAAGAGAAGTACATGTTGGGTGGAAGAAATTATTGATCCTTCAATGGTGAATAATTGTGATTTAAATAAGATGGAAGTTTTGGCAAGAGTTGCTTTGGATTGTGTTGAGGAAGATAGAGATATTAGACCTACAATGAGTCAAGTGGTTGAGATGCTTCAATGTCATGACAAAGATGTTGAGTAA 2400 0.3513 MAFTVSHIFLLVIFLFPFQYCSCYLTSLKKGSSLSVEKHEKDVIVSSNGIFSAGFYQIGENAFSFAIWFTELQNHSHNPANIVWMANREQLVNGKHSKLFILNTGNMLLLDAGQHNTWSSNTASNAHLELYLKEDGNLVLRELQGTTILWQSFDFPTNTLLPNQPLTRHTNLVSSRSLSNHSSGFYKLFFDDNNVLRLDYDGPDVSSTYWPPSWLSAWQAGRSNYNSSRIALLDSLGKFISSDNYIFSTYDYGIHMQRRLTMDFDGNIRVYSRKNVSDNWHVSWQVISDTCIIHGICGANSTCSYDPKKGMKCSCLPGYKMKNHSDWSYGCEPVFDFTCNRSESTFLKLKGFELYGYDSNFVQNSTYKSCENLCLQHCNCTAFQYTYPEGSNIFQCYTKLQLLNGRYSPSFQGITYIRIPKGNNFHKEESVSVNNDVCLVQLHRDYATKPTSSMVKFFLWLSITVGGLEVVCFFVVFVFLNKTNKKSNANPQNTYHALLGFRRYSYSELKVATKNFSNEIGRGGGGVVYSGTLPDQRHAAIKRLNEAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCVEGKHRLLVYEYMKNGSLAENLSSKTNILDWSKRYDIALGTSRVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLKNRNNMNNNSEFSMIRGTRGYMAPEWIFNLPITSKVDVYSYGVVLLEMITGKSSTMMNIEGDNAEVAYNGRLITWVREKKRSTCWVEEIIDPSMVNNCDLNKMEVLARVALDCVEEDRDIRPTMSQVVEMLQCHDKDVE* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3926 799 SMART blect_4 35 156 IPR001480 -
Tpr6g3926 799 Pfam S-locus glycoprotein domain 245 322 IPR000858 GO:0048544
Tpr6g3926 799 Gene3D Phosphorylase Kinase; domain 1 477 588 - -
Tpr6g3926 799 Gene3D - 156 283 IPR036426 -
Tpr6g3926 799 CDD STKc_IRAK 520 792 - -
Tpr6g3926 799 Pfam D-mannose binding lectin 82 175 IPR001480 -
Tpr6g3926 799 PIRSF SRK 1 798 IPR024171 GO:0004674
Tpr6g3926 799 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Tpr6g3926 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Tpr6g3926 799 Pfam Protein kinase domain 517 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3926 799 ProSiteProfiles Protein kinase domain profile. 514 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3926 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 795 - -
Tpr6g3926 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 211 IPR036426 -
Tpr6g3926 799 SMART serkin_6 514 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3926 799 Gene3D Transferase(Phosphotransferase) domain 1 589 799 - -
Tpr6g3926 799 CDD B_lectin 44 156 IPR001480 -
Tpr6g3926 799 Pfam PAN-like domain 339 398 IPR003609 -
Tpr6g3926 799 CDD PAN_AP_plant 340 420 - -
Tpr6g3926 799 ProSiteProfiles Bulb-type lectin domain profile. 19 153 IPR001480 -
Tpr6g3926 799 SUPERFAMILY Protein kinase-like (PK-like) 489 792 IPR011009 -
Tpr6g3926 799 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Tpr6g3926 799 Gene3D - 20 155 IPR036426 -
Tpr6g3926 799 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Tpr6g3926 799 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3926 Tpr-Chr6 44529544 44533724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3926 447 791 Receptor kinase-like Gene Family AT1G56120 37.815 2.26e-61 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr6g3926 Pkinase 3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3926 - - gmx:100784287 1090.49