Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3925 ATGGATGCCATCATTTCTATTGTTGGAAGCGTAGTACCATATGTTTTTGCTCCTATTCGAAGAGAAGTGGGTTATTTGACACACTACGAACGTAATTTCACCAAGCTAAATGATTCTGTTCGCAATCTTGAAGCATCAAGAGAAGATATAAACCGTAGGGTGGAATCTGAAGGAAACAATGGAAAAAAAAAATTAGTTGGTGTTGAAACCTGGTTGGAGGACGGGAATGAGGTCATTCAAAAGGCAAAGCAGCTCCTGGAAGATCCTGGCCATCGAGAGGTTGGGTGTTCGGGCTGGTCTTTCCCTAATTTGAAATTACGACATCAGCTTGGCAAAAAGGCTACAAAGATAGCAAATGAGGTTGCTGTAGTTCAGGGAAGAAGTGATTTCAATGAAGTTTGTTACCTTCCTGCTCTATATGAAATTGCCTCTTCTTCTGCCACATGTGTTGGTGAAAAGTTTGAGACAAGGGAGTTATTTAAGGAGGGCATCTTGAAGGCTCTCAAGGATCCTAAAGCATGCAACATTGGAGTCTATGGTTTCGGTGGGGTGGGTAAGTCCTTTCTTGTTAAAGAAGTCTCTGAAATAGCCAAACAACAAAAATTGTTCGATGTAGTGGTTACCGCCCATGTATCCAAAACTCCAGACATTGAGAAAATTCAAGTGGTGATTGCAGATATGTTGGGTCTGACATTTCCAGAAGAAAGTACTGATGGTAGAGCTATCCGCCTAAGGAAGAGAATTGAAGAAGAGAAAACTGTCCTCGTTATTCTAGATGATATTTGGCAGCCACTTGAACTGGAAAAAGTAGGAATTCCATCCAACAAGGAACACATTGGTTGCAAATTATTGATGACCTCTAGAACTCAAGATGTGTTGCAGCAAATGGCCGTCCAAAAGGATTTGATCACTTTCAGACTTGAAGTTCTAAGTGAAGTAGAAACATGGAGCTTGTTTCAATCTATGGCAGAGGATGTGGTTAACGATATCATTTTCAAAGATGTAGCAACTCAAATTGCTAAACAATGTAAAGGTTTGCCTCTTCTCATACTGACAATGGCAAGCGGATTGAAAAGTAAGGATATTTATGCTTGGAAAGATGCATTGAGCAAATTACAAAATGTTGGTCATGAGAAAATCGATGTCATAACTCATTCTGCTTTAGAGTTGAGTTACAACTGGTTGGCAACTGACGAAACTAAGGCACTCTTCTTGCTTTCTGCTGTACTAGGACAATATGGTGAAGATTACTTATTGAAAGTTGCAATGGGTTTGGAGATATTCAACAATATAAGTACTGTGGATGCTGCAAGAAACAGACTTCATACTATAATTGGATCATTGAAAGCATCTTGCCTTTTACTTGAAGGTAATAAGAGAAGTCGGCGAATCCAAATGCATGACCTTGTTCGTGATGTAGGTATCTCCATAGCATGTAGGAATAAAGATGTTTATATTTTGAAACCGGAGACTGGTTTGAAGGAATATCTTACCATGGATTTTATGAAAATGTGCTCGCAGATCATCTTATTACAAATAAACGAGCTTCCAAAAAAGTTTGATTGTCCTAATGTTAAACTTTTAGTTTTCGAGAGTGCAAATCGTTTTTTAGAAATCCCAGATACTATTTTTGATGGGATGGGAAGCCTTAAAGTGTTAGATATAACACTTTTGAACTTGTCTTCATTACCCACTTCTTTCCGTTCCCTAACAGACCTTCAGACATTGTGTTTGAACCAATGTGTTTTGGAAAATATTGATATAATAGGAGATTTGAAAAACTTAGAAATTCTTAGTCTTGAGGATTCTTCGATGATCAAATTGCCAAACAAAATAAGGGAAATGACTCAACTAAGAATGCTTGATTTGAGCAATGCTGGAATAGAAATCATCCCACCCAACATCATTTCAAGCTTGTCTAACTTAGAGGAGCTGTATATGGGCAATACCTCAATTACGTGGGAAGACGAGAATTCACAGCAAAAAGAAAATGCAAGCCTTGCCGAGCTTGGACAATTGTACAACTTGACGGCTCTAGAATTACAAATTCACGAGGCTTGTATTTTGCCAAGGGACTTGAAATTAATGTTTGAAAAGCTGCAAAGATATAAAATAGCCATTGGAGATGTATGGCAATGGTCTGACATTAAGGACAGAACCTCGAACACACTGATGCTCAAACTTGATACCAACATACATTTGGAGCTGGGGATTAAAGCATTAATTAAAGGCGTTGAGAATTTATACATGGATGAAGTAGATGGCATTCAGAATGTGTTGTATGAAATGAACAGGGAAGGTTTTCCATTGTTGAGGCACCTCCACATCCAAAACAATGCAAAAATGAAGCACATAGTTTACTCTACGGAGAGGAACCAAGTCCATGTTTCCTTTCCCATCTTGGAAACTCTTTCAATTAATAATCTTGAAAATTTGGAGCAGATATGTCATGGCCCGCTTGTAATTAATTCTTTTGGTAAGCTCAGTGTTATCAAAGTAAATAATTGCGCCCAATTGACATATCTTCTCTCCTTATCAATGGTTAAAAGTCTTTCCAATCTTTCTGAGATCGAAGTTTGTCAATGCAATTCTATGAAGAACATAGTGCTCAGAGACTTGCCTGATGAAAAAGTAGAGTTTCCTTCTTTGCGTTCTTTAACTTTACAACACTTGGATACACTTGATAACTTTTTCTCTTATGAGCTGATGACATCTTCGATAACTTCTGCACGGCCATTTGTTAGTGCTCAGGTTGCATTCCCTGATTTGACAACCCTTAAATTGAGCTCACTCAATTTAGATAAAATTTGGAATGACAATCAACATTCTATGTACAACTTGTCAGTCTTGATTGTGGAGAACTGTGGTGAGCTAAAGTACTTATTTTCTTCTACCATGGTTGAAACTTTTGTTAACCTCAAACGGGTTGAAATTAGTAAATGTAATTCGATGAATGAGATAATAGCTACAGAATGGAGAAACGATGTTACTATTGCATTGAATGAGGTTCCATTTCCCAAATTGAAGACAATCGTGCTGAAGGACATGGAAAATTTGAAGACAGTATGGCATTACCAATTTGACACAGTGAAGACGTTGGAAGTCGAAAATTGTGAGAAAATAGTGGTTGTTTTTCCTTCCTCAATGCAGAAGACTTATCATAATCTGGAGATGTTAGTGGTTAAGGATTGTGCTTTAGTGGAACTTATATTTGAATTGAGTTCTAGTGAAAATAGCAGCATAGAAAGTGAAACACAGTTGAAGGTAATTAATTTAGCTCAATTGCCGAAGCTGAAAAAGATATGGAGCATCGATCCTGAAGGAATTCTTAGTTTTCATAATCTACAAAAGGTTGATCTAAGTAAGTGTGAAAGTATGGAGTATGTATTTCCATTTTCTGTTGCCACTGGCTGCCGACATCTCAAACAACTTCAGATAGAATATTGTGGGAAGATGAAGGAAATTGTTTCAGAGAAGACAGGATCTACGTGTGCAAGTCCCACATTTGAGTTTAATAAGCTAAATACTATAGTGCTTTGGGGCTTACATTCACTTGAGGGCTTCTATGCAGAAAGTCATATTCTAGCATGCCCCTCTTTGAATAAAATTGATGTTTACAGATGTGCAAAGTTGAATTTATACAAAACTGTAGCTCTGCCTGCAAGCATCCCTCAAAGATGTCAAGATGAGAATCCCTCGGATATATTCCAACCACTTTTCATTGTGGAAGAGGTGATTCCAAACTTGGAGTGGATGACAATAAACGATAGGGATGCTATGGTGATATTGAAATCACAAAATTTAGATTCCCTCTTCAACAAATTGACATCTCTTGGTTTGTATGATTTTAAGAATGAAGAGGCTACATATCCTTACTGGTTTCTCCAAAATGCACGTTCTCTTGAACACCTAGCTGTTGCAGACAGTTCCTTCAAGAAGATATTTGAAGATGAAAGACTAGTGACTATGAAAATTCACACACGCCTCAAAAAGTTGTGGCTTATTCAATTACCTAAACTTCAGCATATATGTGAAGATGGATCTCTAATTCACCCACTTCTTGAGCATCTTGATAGCTTACTTATTCTTGATTGTCCTAGTTTGACAAATTTGTTGCCTTCCTCTGTCACCTTTAGCCACCTAACAAAAATGAAGATAACAAAATGCAATAAACTTGTAAATTTAATAACATCCTCGACTGCGCAAAGTTTGGTAAAACTCACATTATTGAAGGTAGAGGACTGTGACTCACTACAAGAAATAATAACGGGAAAGGAAAATGTTGATATTGCATTTGTTAGTCTTCAAAGATTGATGCTCAAAGGTTTACCAAGCCTCAACAACTTTTGCTCAAGTAAGTGTTTCTTGAAGTTTCCATTGTTGGAGTATGTAGTTGTGAGCAACTGTCCTGTCATGGAGATATTCTCTGAGGGAAACACAAGCACACCAAGTCTTCGAAAAGTCAAAATTGAAGAAAATGGTGAAGAATGTTATTGGAAGGGCAACCTAAATGATACCATAAAAAAAGATGTTTGA 4536 0.3739 MDAIISIVGSVVPYVFAPIRREVGYLTHYERNFTKLNDSVRNLEASREDINRRVESEGNNGKKKLVGVETWLEDGNEVIQKAKQLLEDPGHREVGCSGWSFPNLKLRHQLGKKATKIANEVAVVQGRSDFNEVCYLPALYEIASSSATCVGEKFETRELFKEGILKALKDPKACNIGVYGFGGVGKSFLVKEVSEIAKQQKLFDVVVTAHVSKTPDIEKIQVVIADMLGLTFPEESTDGRAIRLRKRIEEEKTVLVILDDIWQPLELEKVGIPSNKEHIGCKLLMTSRTQDVLQQMAVQKDLITFRLEVLSEVETWSLFQSMAEDVVNDIIFKDVATQIAKQCKGLPLLILTMASGLKSKDIYAWKDALSKLQNVGHEKIDVITHSALELSYNWLATDETKALFLLSAVLGQYGEDYLLKVAMGLEIFNNISTVDAARNRLHTIIGSLKASCLLLEGNKRSRRIQMHDLVRDVGISIACRNKDVYILKPETGLKEYLTMDFMKMCSQIILLQINELPKKFDCPNVKLLVFESANRFLEIPDTIFDGMGSLKVLDITLLNLSSLPTSFRSLTDLQTLCLNQCVLENIDIIGDLKNLEILSLEDSSMIKLPNKIREMTQLRMLDLSNAGIEIIPPNIISSLSNLEELYMGNTSITWEDENSQQKENASLAELGQLYNLTALELQIHEACILPRDLKLMFEKLQRYKIAIGDVWQWSDIKDRTSNTLMLKLDTNIHLELGIKALIKGVENLYMDEVDGIQNVLYEMNREGFPLLRHLHIQNNAKMKHIVYSTERNQVHVSFPILETLSINNLENLEQICHGPLVINSFGKLSVIKVNNCAQLTYLLSLSMVKSLSNLSEIEVCQCNSMKNIVLRDLPDEKVEFPSLRSLTLQHLDTLDNFFSYELMTSSITSARPFVSAQVAFPDLTTLKLSSLNLDKIWNDNQHSMYNLSVLIVENCGELKYLFSSTMVETFVNLKRVEISKCNSMNEIIATEWRNDVTIALNEVPFPKLKTIVLKDMENLKTVWHYQFDTVKTLEVENCEKIVVVFPSSMQKTYHNLEMLVVKDCALVELIFELSSSENSSIESETQLKVINLAQLPKLKKIWSIDPEGILSFHNLQKVDLSKCESMEYVFPFSVATGCRHLKQLQIEYCGKMKEIVSEKTGSTCASPTFEFNKLNTIVLWGLHSLEGFYAESHILACPSLNKIDVYRCAKLNLYKTVALPASIPQRCQDENPSDIFQPLFIVEEVIPNLEWMTINDRDAMVILKSQNLDSLFNKLTSLGLYDFKNEEATYPYWFLQNARSLEHLAVADSSFKKIFEDERLVTMKIHTRLKKLWLIQLPKLQHICEDGSLIHPLLEHLDSLLILDCPSLTNLLPSSVTFSHLTKMKITKCNKLVNLITSSTAQSLVKLTLLKVEDCDSLQEIITGKENVDIAFVSLQRLMLKGLPSLNNFCSSKCFLKFPLLEYVVVSNCPVMEIFSEGNTSTPSLRKVKIEENGEECYWKGNLNDTIKKDV* 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3925 1511 PANTHER - 23 1091 - -
Tpr6g3925 1511 PANTHER - 1359 1506 - -
Tpr6g3925 1511 PANTHER - 1111 1211 - -
Tpr6g3925 1511 Gene3D Ribonuclease Inhibitor 965 1229 IPR032675 -
Tpr6g3925 1511 PANTHER RPP4C3 1111 1211 - -
Tpr6g3925 1511 PANTHER RPP4C3 1359 1506 - -
Tpr6g3925 1511 PANTHER RPP4C3 23 1091 - -
Tpr6g3925 1511 Pfam NB-ARC domain 165 393 IPR002182 GO:0043531
Tpr6g3925 1511 Coils Coil 26 60 - -
Tpr6g3925 1511 SUPERFAMILY L domain-like 465 894 - -
Tpr6g3925 1511 Gene3D Ribonuclease Inhibitor 1261 1498 IPR032675 -
Tpr6g3925 1511 PRINTS Disease resistance protein signature 175 190 - -
Tpr6g3925 1511 PRINTS Disease resistance protein signature 248 262 - -
Tpr6g3925 1511 PRINTS Disease resistance protein signature 343 357 - -
Tpr6g3925 1511 PRINTS Disease resistance protein signature 613 629 - -
Tpr6g3925 1511 Gene3D Ribonuclease Inhibitor 503 964 IPR032675 -
Tpr6g3925 1511 Gene3D - 143 305 IPR027417 -
Tpr6g3925 1511 SUPERFAMILY RNI-like 920 1153 - -
Tpr6g3925 1511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 405 IPR027417 -
Tpr6g3925 1511 Gene3D - 309 395 IPR042197 -
Tpr6g3925 1511 SUPERFAMILY RNI-like 1090 1422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3925 Tpr-Chr6 44494760 44520135 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3925 176 635 WRKY Transcription Factor Family AT5G45050 22.905 2.48e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3925 - - cam:101493922 2050.4