Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3921 ATGAATAATAATATGGATTTCTCATTCACACTGTTTCTTCTAGTATCATTAGCCTTTTCATTCCAATGTTCATCTTCTTCATCATCATCATCACTTAGAAAAGGTTCATCCCTCTCTGTAGAAAATCCAGAAGATAAACTAATCTCACATAATGGTATGTTCTCTGCTGGCTTTATTTCCATTGGTCAAAATGCATATTCCTTTGCAATATGGTTCACAGAACCAAATTCACTCAACCACAAAAACACAATCGTTTGGATGGCGAATCGGGACCAACCCGTTAACGGAAAACGATCAAAACTCACCCTTTTAAACACAGGAAACATTGTCTTGCTTGATGTTTCTTTAAACAATGTTTGGTCTTCAAAAACAGCATCATTGGAACCATTAGAGTTGCATCTCAAAAATGATGGAAATCTTGTGTTGCTTGAACTTCAAGGAACCAAAATTTTGTGGCAGAGTTTTGATTCTCCAACAGATACTCTTGTTCCTGGTCAACCCCTTACAAGATATACAAAGCTTGTAGCTTCAAGAAGTGACACTAATCATTCTTCTGGCTTCTACCAGTTCTTCTTTGACGATGAAAATATTCTCGGTCTTCATTACAACGGTCGCGATGTTTCTAGCTCTTACTGGCCAAAACCTTGGCTTCTAAGTTGGGATGTTGGCAGATCTAATTTCAATAGTAGCAGAATTGCAGTGTTGGGTTCTTTTGGTGAGTTCTATTCATCAGATAATTTCACTTTTACTACATCTGATTATGGATCTGTTATGCAAAGAATAATGAAATTAGATTCTGATGGTGTTGTGAGAGTTTATAGCAGAATTAATGTCTCACAGAATTGGTATGTTTCATGGCAAGCCTTTTCTGGTACTTGCACAGTTCATGGAGTTTGTGGAGCTAATAGTACATGTAGCTATAGTCCTAAACTTGGAAGAAAGTGCTCTTGTATTCCAGGGTATAGAATGAAGAATCCTAATGATTGGTCTTATGGTTGTGAGCCTATGTTTGATTTCACTTGCAACAAAAGTGAGTCAACTTTCTTAGAGATGAAAAATGTTGAGTTTTATGGATATGACTTTCATTATATTGAAATTTGTAACTTTAGTACTTGTGTGGATTTATGCTTACAAGATTGTAATTGTAAAGCATTTCAATTCTCATATTGGGAGAAACATGGCTTCTATAGATGTTTTACAAAAACACAGTTGCAAAATGGAAGGTATTATCCCATTTTCAAAGGATCTACCTATTTGAGATTACCTAAAGGTAATACTTTTTCTTTGAAACAAACTTCCAATCCAAGCAACAACGATGTTTGCTCTGAAAAACTTCAACGAGTTTATGTCAACGAAGGTGAGAATCATTTTGTGAAGTTTTTTCTATGGTTTGCCACCGCGATCGGAGCTTTTCAAACGGTCTGCATTTTCGTCATTTGGTGTTCTCTATTTAGGTCGAACCAAAAGACTTATGCAGACCAAGAGGGCTACCATATAGCGGATATCGGGTTTAGAAAATTTAGTTACTTGGAGCTAAAGAAAGCAACAAAAGGGTTCAGTCAAGAGATCGGAAGAGGTGGAGGAGGTGTTGTATACAAAGGCCTATTATCTGATGAAAGACATGCTGCAATAAAGAGACTTTACAATGCTCAACAAGGAGGAGAAGGTGAGTTTCTCGCTGAAGTAGGCATCATTGGAAGGCTTAATCACATGAATTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAATATAGATTATTGGTTTATGAATACATGGAAAATGGTTCTTTAGCTGACAATTTATCATCTAATAAACTTGATTGGAGTAAAAGGTACAAAATTGCTTTAGCAATAGCAAGAGTTTTAGCATATCTACATGAAGAATGCTTGGAGTGGATTTTACATTGTGATATAAAGCCACAAAATATACTTCTTGATTCTAACTTTCAACCCAAGTTAGCTGATTTTGGATTGTCTAAACTCCAAAACAGAAACAACCTCAACAATTCGAGCGTGTCTATGATTAGAGGAACAAGAGGGTATATGGCGCCTGAATGGATTTTCAACTTGCCAATAACATCTAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGATAACAGGAAAAAGTCCAACTACTGGTTTCAAAATTGTTAATGCAGAAGAGGAAAGTGTTGGAAGGTTGGTTACATGGGTGAGAGAAAAAAGAGGGAGTAGCATATCTTGGTTGGAGGAAATTGTTGATCCTAATATTGGATTAAATTATGATAAAAGTAAGATGGAGATTTTAGCTAAAGTTGCTTTGGATTGTGTTGTGGATGAAAGAGATTCAAGGCCTACTATGAGTAGAGTTGTTGAGATGCTTCAATACCATGGAAATGATTGA 2397 0.3605 MNNNMDFSFTLFLLVSLAFSFQCSSSSSSSSLRKGSSLSVENPEDKLISHNGMFSAGFISIGQNAYSFAIWFTEPNSLNHKNTIVWMANRDQPVNGKRSKLTLLNTGNIVLLDVSLNNVWSSKTASLEPLELHLKNDGNLVLLELQGTKILWQSFDSPTDTLVPGQPLTRYTKLVASRSDTNHSSGFYQFFFDDENILGLHYNGRDVSSSYWPKPWLLSWDVGRSNFNSSRIAVLGSFGEFYSSDNFTFTTSDYGSVMQRIMKLDSDGVVRVYSRINVSQNWYVSWQAFSGTCTVHGVCGANSTCSYSPKLGRKCSCIPGYRMKNPNDWSYGCEPMFDFTCNKSESTFLEMKNVEFYGYDFHYIEICNFSTCVDLCLQDCNCKAFQFSYWEKHGFYRCFTKTQLQNGRYYPIFKGSTYLRLPKGNTFSLKQTSNPSNNDVCSEKLQRVYVNEGENHFVKFFLWFATAIGAFQTVCIFVIWCSLFRSNQKTYADQEGYHIADIGFRKFSYLELKKATKGFSQEIGRGGGGVVYKGLLSDERHAAIKRLYNAQQGGEGEFLAEVGIIGRLNHMNLIEMWGYCAEGKYRLLVYEYMENGSLADNLSSNKLDWSKRYKIALAIARVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLQNRNNLNNSSVSMIRGTRGYMAPEWIFNLPITSKVDVYSYGIVVLEMITGKSPTTGFKIVNAEEESVGRLVTWVREKRGSSISWLEEIVDPNIGLNYDKSKMEILAKVALDCVVDERDSRPTMSRVVEMLQYHGND* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3921 798 Gene3D Phosphorylase Kinase; domain 1 482 592 - -
Tpr6g3921 798 CDD B_lectin 47 158 IPR001480 -
Tpr6g3921 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 798 - -
Tpr6g3921 798 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Tpr6g3921 798 ProSiteProfiles Protein kinase domain profile. 517 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3921 798 ProSiteProfiles Bulb-type lectin domain profile. 23 155 IPR001480 -
Tpr6g3921 798 PIRSF SRK 2 797 IPR024171 GO:0004674
Tpr6g3921 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 175 IPR036426 -
Tpr6g3921 798 SUPERFAMILY Protein kinase-like (PK-like) 497 794 IPR011009 -
Tpr6g3921 798 SMART serkin_6 517 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3921 798 CDD STKc_IRAK 523 793 - -
Tpr6g3921 798 Pfam D-mannose binding lectin 83 171 IPR001480 -
Tpr6g3921 798 ProSiteProfiles PAN/Apple domain profile. 341 425 IPR003609 -
Tpr6g3921 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Tpr6g3921 798 SMART blect_4 29 158 IPR001480 -
Tpr6g3921 798 Gene3D Transferase(Phosphotransferase) domain 1 593 798 - -
Tpr6g3921 798 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 798 - -
Tpr6g3921 798 CDD PAN_AP_plant 340 422 - -
Tpr6g3921 798 Gene3D - 24 157 IPR036426 -
Tpr6g3921 798 Pfam Protein kinase domain 520 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3921 798 Pfam S-locus glycoprotein domain 245 324 IPR000858 GO:0048544
Tpr6g3921 798 Pfam PAN-like domain 341 402 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3921 Tpr-Chr6 44461932 44464568 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3921 507 792 Trihelix Transcription Factor Family AT5G38560 41.980 5.13e-65 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr6g3921 Pkinase 2.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3921 - - gmx:100783758 1140.18