Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3916 ATGGCTGATTCAACCGACAACTCTGCTGAAACTAGTCAACGTAATAAAAAAAGTGTTAGAGGTCCCACTATGTTGAAAGCAATTGAAAACGTTCGTAAAACGGGTATAAAGATCCCTCTCCAGTTTGATCTAGAAACTGGAGAGTGTTATGGTAACAATGCCTCCCATTTTAAGAGTTACGTAGCACTTCTTACTCGAGAAAGATGCAGTATTGCGAAAGAGTTGTGGAAACATATACCTGAAGGAGTAAAAAATGCTATGTGGACAGATATTAAGGCTATTTTTGTTATACCCGGGTTTGATGATGCAAAAAGGAATGATCATTTTAAGAAAATATGGTTGTGGAAACAAGTGTTGTTTAAGATAGTGGGGTGCTATCTTGTGTTGTATGTTAGAAAGATTGTTAGGGGGTCTTGGGGTTGCACTCTTAAACTTACAGCTTGTATAGCTCATGGGATTTGTGGAGATAATAGTACATGTAGTTATAATCCTAAGCATGGAAGAAAATGTTCTTGTATTCCAGGTTATAGAGTCAAGAATCATAGTGATTGGTCTTATGGTTGCGAACCTATGTTCGATTTTACTTGCAATAGAAGCGAGTCTACCTTTTCAGGGATGGTAAATGTTGAGTTTTATGGGTATGACATTCACTATGTTGAAGTTAGTAACTATAGTTCTTGTGAGAAATTATGCTTACAAGATTGTAATTGTAAAGGATTTCAGCACGGTTTTGGATCGGGAAAAGGCTTTTATAAGTGTTATACAAAAACACAATTGAGAAATGGAAGGCATTCGCCATTCTTTGTAGGAACAACATACTTGAGATTGCCTAAAGGTAATAACTTTTCGAAACAAGAAACTTCCACTCCGGGGGACCATATTTGTCAAGTGAAACTTCAAAGAGTTTTCGTTAGTGCAAGCGAGAGTCATTTTGTGAAGTTTTTTTTATGGTTTGTCACCGCGATTGGAGCTTTCGAGGTGGTTTTCATTTTTGTCATTTGGTGCTCCCTATTAAGGACGCACCAAAATACTAATGCAGACCAACAGGGCTACCATCTAGCGGATATTGGGTTCCGAAAATTCAGTTACTTGGAGCTAAAGAAAGCAACAAAAGGGTTCAGTCAAGAGATCGGAAGAGGCGGAGGAGGGGTTGTTTACAAAGGCATATTATCTGATGAAAGACATGCTGCAATAAAGAGACTTTACAATGCTCAACAAGGAGGAGAAGGCGAGTTTCTCGCTGAAGTAGGCATTGGAAGGCTTAATCACATGAATTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAATATAGATTATTGGTTTATGAATACATGGAAAATGGTTCTTTAGCTGACAATTTGTCATCTAATAAACTTGATTGTAGTAAAAGGTACAAAATTGCTTTAGCAATAGCAAGAGTTTTAGCATATCTACATGAAGAATGCTTGGAGTGGATTTTACATTGTGATATAAAGCCACAAAATATTGGATTAAATTATGTACATAGTTGTCTACCCAAAACATACTTTGCAGCAAATAGATAA 1548 0.3695 MADSTDNSAETSQRNKKSVRGPTMLKAIENVRKTGIKIPLQFDLETGECYGNNASHFKSYVALLTRERCSIAKELWKHIPEGVKNAMWTDIKAIFVIPGFDDAKRNDHFKKIWLWKQVLFKIVGCYLVLYVRKIVRGSWGCTLKLTACIAHGICGDNSTCSYNPKHGRKCSCIPGYRVKNHSDWSYGCEPMFDFTCNRSESTFSGMVNVEFYGYDIHYVEVSNYSSCEKLCLQDCNCKGFQHGFGSGKGFYKCYTKTQLRNGRHSPFFVGTTYLRLPKGNNFSKQETSTPGDHICQVKLQRVFVSASESHFVKFFLWFVTAIGAFEVVFIFVIWCSLLRTHQNTNADQQGYHLADIGFRKFSYLELKKATKGFSQEIGRGGGGVVYKGILSDERHAAIKRLYNAQQGGEGEFLAEVGIGRLNHMNLIEMWGYCAEGKYRLLVYEYMENGSLADNLSSNKLDCSKRYKIALAIARVLAYLHEECLEWILHCDIKPQNIGLNYVHSCLPKTYFAANR* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3916 515 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 129 500 - -
Tpr6g3916 515 SUPERFAMILY Protein kinase-like (PK-like) 349 497 IPR011009 -
Tpr6g3916 515 ProSiteProfiles Protein kinase domain profile. 371 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3916 515 Gene3D Transferase(Phosphotransferase) domain 1 446 506 - -
Tpr6g3916 515 Gene3D Phosphorylase Kinase; domain 1 335 445 - -
Tpr6g3916 515 SMART serkin_6 371 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3916 515 Gene3D Hepatocyte Growth Factor 204 271 - -
Tpr6g3916 515 Pfam Protein kinase domain 374 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3916 515 MobiDBLite consensus disorder prediction 1 20 - -
Tpr6g3916 515 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 129 500 - -
Tpr6g3916 515 MobiDBLite consensus disorder prediction 1 19 - -
Tpr6g3916 515 CDD PAN_AP_plant 197 277 - -
Tpr6g3916 515 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Tpr6g3916 515 ProSiteProfiles PAN/Apple domain profile. 196 272 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3916 Tpr-Chr6 44438004 44440692 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3916 319 508 Receptor kinase-like Gene Family AT1G56120 41.837 2.24e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr6g3916 Pkinase 3.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3916 - - gmx:100783758 525.783