Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3907 ATGGGAAAATACATGAAGAAATCCAAAATCGCCGGCGACGTCGCAGCCGTAATCATGGAAGCTCCATCACACACCACTACTGTCGGTGTACGGACAAGAGCAAAAACCCTCGCTCTCCAGAAATCCCCGATTGCCTCGCCGCAACATATGGACTCCTCTTCCTACCTCGAACTTCGCAGTCGCCGCCTCCGTAAACTCCCTCCGCCGCCGCAACCTCGCAGGGAGAACGCCTCTGCCGGAAATTCGAGACTTCGAGAATGTTCTGGCAACACGTCGTCGTCCGTTGAAAAATTGGGGAGTTTTGGTGCTGAAGAGGAGAATGCTGATTTAACTGTGGAAGGTTCTTTTGGTGAAAATTTCTTAGAAATTGAAGGCAAAGATAGAAGCACCAGGGAAAGCACACCTTGTAGTTTAATAAGGGATTCAAGTGTCATTCATACCCCTGGTTCAACGACAAGGCAAAGGACGCAACGAGTAATTCACGAAAACATGCAAAGAAATATTCCAACATCTACTGAAATGGATGAGTTCTTTGCTTTGGCAGAGAAGCAGCAACAAGCAAATTTTATGGAAAAGTACAATTTTGATGTAGTTAATGATGTACCTCTACCAGGACGGTATGAATGGGTCCCTGTACTTAACTAG 645 0.4636 MGKYMKKSKIAGDVAAVIMEAPSHTTTVGVRTRAKTLALQKSPIASPQHMDSSSYLELRSRRLRKLPPPPQPRRENASAGNSRLRECSGNTSSSVEKLGSFGAEEENADLTVEGSFGENFLEIEGKDRSTRESTPCSLIRDSSVIHTPGSTTRQRTQRVIHENMQRNIPTSTEMDEFFALAEKQQQANFMEKYNFDVVNDVPLPGRYEWVPVLN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3907 214 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 213 IPR044275 GO:0004861|GO:0045736|GO:0051726
Tpr6g3907 214 MobiDBLite consensus disorder prediction 75 98 - -
Tpr6g3907 214 Pfam Cyclin-dependent kinase inhibitor 166 212 IPR003175 GO:0004861|GO:0005634|GO:0051726
Tpr6g3907 214 MobiDBLite consensus disorder prediction 62 106 - -
Tpr6g3907 214 Gene3D p27 151 214 IPR044898 -
Tpr6g3907 214 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 1 213 - -
Tpr6g3907 214 PIRSF CKI_KRP_plant 1 214 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3907 Tpr-Chr6 44336880 44340908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3907 1 212 Core Cell Cycle Gene Families AT5G48820 44.672 5.26e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3907 - - gmx:100782379 231.106