Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3894 ATGAAAACAAAGACGATAAAACTTGAAATCATCAACATCACCGCGTGGTCTTGGCAATCACCTTGGATTTATATTCATCAGAATCTTACCTATGCAATTCTGACCCGAATTGCAATCACCACCATTAACAGAAGTGGGATAGAACCCTCATGTTGTACCCCTCGCTTGAGGTATCTTGCGATAGTGTGTGGTTCCTGGGCGAAAACTATTTTTATTCCTGATGAGAAAGAACGCGAGAAGGCTATTGAAGAATTATACGAGGCTTTACAGTTTCTTGAGAATGAGTTGAAGGATAAGTTTTTTGGAGGAGACAAGATTGGCTTTGTGGATATTGCTGCTCTTTTCATCCCTTTATTTCAAGAAGTGGCAGAGAAGCAGTTATTTACAAGTGATAAATTTCCCAAGCTACACAAATGGAGTCAAGATTTTTACAACCATCCAGTCGTCAAAGAAACTATGCCTTCAAAAGAACAACAATTTGCGTATTTTAAAGCCCGCGCTGCAAGCCTTGCTGCTCCATCAAAATAG 528 0.3977 MKTKTIKLEIINITAWSWQSPWIYIHQNLTYAILTRIAITTINRSGIEPSCCTPRLRYLAIVCGSWAKTIFIPDEKEREKAIEELYEALQFLENELKDKFFGGDKIGFVDIAALFIPLFQEVAEKQLFTSDKFPKLHKWSQDFYNHPVVKETMPSKEQQFAYFKARAASLAAPSK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3894 175 Coils Coil 75 95 - -
Tpr6g3894 175 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 65 169 IPR045073 -
Tpr6g3894 175 Gene3D - 58 173 - -
Tpr6g3894 175 CDD GST_C_Tau 66 166 IPR045074 GO:0004364|GO:0006749
Tpr6g3894 175 Pfam Glutathione S-transferase, C-terminal domain 72 147 IPR004046 -
Tpr6g3894 175 SUPERFAMILY GST C-terminal domain-like 63 168 IPR036282 -
Tpr6g3894 175 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 65 169 - -
Tpr6g3894 175 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 40 163 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3894 Tpr-Chr6 44241760 44243046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3894 75 172 Glutathione S-transferase Gene Family AT3G09270 48.544 6.93e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3894 K00799 - gmx:100306196 163.696