Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3860 ATGTCTCCACCAGGTTCATCAAGATGGAGCCCTACAACTGAACAGCTTATGATTTTAGAAGAACTGTATAGAAGTGGAATTAGAACTCCTAGTGCTTCTCAAATTCAGCAAATAACTACTCACCTTTCTTTCTATGGTAGAATAGAAGGAAAAAATGTTTTCTATTGGTTTCAGAATCATAAGGCTAGGGATAGGCAGAAACTTAGAAGGAAACTTAACAAACAACTGCAGCTACAGCAGCAGCAACAACAACAACAACAGCAGCAACAACTACAAGTTCATCATTATCATCAACTCAATCATGATAATATGATTAGTAATCATTGTGTTGGTAGTACTTTTGGTTACCCTTTTGGATCTAATGCACAAGACTTTTCATTTTTTAACTCACCTAGCTTTCTTTTTCAGGGACCAGTAGCTGCAACTGCAAACACATCACAAGGAGCAATGAATTGCAAATGGATAAATGGTTATAATAATCATCAAAGTTTGGTGGAGAAGAAAGATATTGCATTAAGCAACTATGGTACTTGGACACTTATGGATAATGTTAATCATGAACCAAAAACTTCATGTTGCACTAAACCTCTCAAGACTCTTGATCTCTTCCCACTCTCAACAACAAGAATCAAAGAAGACTAG 642 0.3614 MSPPGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQQQQQQQQQLQVHHYHQLNHDNMISNHCVGSTFGYPFGSNAQDFSFFNSPSFLFQGPVAATANTSQGAMNCKWINGYNNHQSLVEKKDIALSNYGTWTLMDNVNHEPKTSCCTKPLKTLDLFPLSTTRIKED* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3860 213 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 212 - -
Tpr6g3860 213 Coils Coil 65 89 - -
Tpr6g3860 213 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 212 IPR044555 GO:0003700|GO:0099402
Tpr6g3860 213 CDD homeodomain 8 67 IPR001356 GO:0003677
Tpr6g3860 213 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Tpr6g3860 213 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Tpr6g3860 213 Gene3D - 2 67 - -
Tpr6g3860 213 SMART HOX_1 4 71 IPR001356 GO:0003677
Tpr6g3860 213 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3860 Tpr-Chr6 43884294 43885687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3860 1 74 Wox Gene Family AT2G28610 83.784 7.49e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tpr6g3860 Homeodomain 7.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3860 - - cam:101510991 254.988