Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3820 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCCCACCCCACTTCGCCCTCTTCATCACCTTTTAGGAAGAATAGAAAAAACAGTAGAAAGAAGCTGGGAGCAAGAACTTCTTCATTTGAGTATTGGGGGAATGAGCCTCTTCATAAGATACCTGATAGGATGTCCCTTAATGGGTCGTCTAAATTTGCTTCTTTGTTCACTCAACAAGGCAAAAAAGGTACCAACCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACAATATTTTGTGGAGTTTTCGACGGCCACGGTCCATATGGTCATATGGTTGCAAAAAGAGTGAGAGATTCACTTCCTCTAAAACTGAATACTCATTGGGAAAATAATGTATCTGGTGGGGAAGTCCTCAAGGAGATTAGTGTTAATGCAGCAGGAAGCATGAACTCAGAAGAAGTTGCATTTATATCTGCTGACGAGGAATCCAGGGTATCTGTTGATGCTGAGGAAACGGAAAAATTCCCAGAAATCTTTCTAACGCTTAAAGAATCCTTTTTAAAGGCATTCAAACTTATGGATAGAGAATTGAAGACACACCAAACAATCGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGGTTAAGCAGGGTCGTGATCTTGTGCTTGGAAATATTGGTGATTCTAGAGCTGTGTTGGGTACTAGAGTAAAAGATAATTCTCTTGCTGCAGTGCAGTTAACTGTGGATTTAAAACCTAATCTTCCAGCCGAAGCAGAGAGAATTCGCAAATGTAAAGGGCGTGTCTTTGCTCTTCACGATGAGCCTGAAGTTTGCCGAGTCTGGTTGCCAAATAATGATTCACCTGGCTTAGCCATGGCAAGGGCATTTGGAGATTTTTGTCTGAAAGATTTTGGTCTAATATCTGTTCCAGATGTATCATACAGAAGACTAACTGAGAAGGATGAGTTTATTGTCATGGCAACAGATGGGATTTGGGATGTGCTAACAAACAAGGAAGTGGTAGACATTATAGCGGCTGCACCGCGGCGTTCAACAGCGGCGAGATCACTGGTTGAGACAGCAGTGAGAGCATGGAGATACAAATATCCAACTTCAAAAGTCGATGACTGTGCCGTGGTTTGTCTCTTTCTAGACTCAGACGTTCAAAAATTATCGACCGCTTCTCATACCAACAAGTCCAAAGAACATCCTCCTAGTTCAGGAATTCAAGTCAGCAGCAATGGTGATAATGAAGGTGTTTCTGAACCTAATGTTCTAGCAAGATCAGGAACATGCAGAGACGACAATAATAATAACATTGATGAAGAATTTAAGGAAGAGGAGGAGATAGATGCTGAGACAGAAAAAGAGTGGTCTGCTCTTGAAGGTGTATCGCGTGTCAACACATTATTAAACCTTCCAAGATTTAATCCTGATAAAGACGACAAAGCAGCTGCAGAAGAAGGGGTCCGAAAACGCAAATGA 1479 0.4226 MGSCFSAESRSPHPTSPSSSPFRKNRKNSRKKLGARTSSFEYWGNEPLHKIPDRMSLNGSSKFASLFTQQGKKGTNQDAMVVWENFCSREDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNTHWENNVSGGEVLKEISVNAAGSMNSEEVAFISADEESRVSVDAEETEKFPEIFLTLKESFLKAFKLMDRELKTHQTIDCFCSGTTAVTLVKQGRDLVLGNIGDSRAVLGTRVKDNSLAAVQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVCRVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVSYRRLTEKDEFIVMATDGIWDVLTNKEVVDIIAAAPRRSTAARSLVETAVRAWRYKYPTSKVDDCAVVCLFLDSDVQKLSTASHTNKSKEHPPSSGIQVSSNGDNEGVSEPNVLARSGTCRDDNNNNIDEEFKEEEEIDAETEKEWSALEGVSRVNTLLNLPRFNPDKDDKAAAEEGVRKRK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3820 492 SMART PP2C_4 52 380 IPR001932 -
Tpr6g3820 492 MobiDBLite consensus disorder prediction 439 453 - -
Tpr6g3820 492 PANTHER ALPHABET, ISOFORM E-RELATED 1 470 - -
Tpr6g3820 492 MobiDBLite consensus disorder prediction 1 33 - -
Tpr6g3820 492 MobiDBLite consensus disorder prediction 392 454 - -
Tpr6g3820 492 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 470 - -
Tpr6g3820 492 MobiDBLite consensus disorder prediction 1 23 - -
Tpr6g3820 492 CDD PP2Cc 63 382 IPR001932 -
Tpr6g3820 492 MobiDBLite consensus disorder prediction 392 418 - -
Tpr6g3820 492 MobiDBLite consensus disorder prediction 470 492 - -
Tpr6g3820 492 Gene3D - 55 384 IPR036457 -
Tpr6g3820 492 SUPERFAMILY PP2C-like 59 383 IPR036457 -
Tpr6g3820 492 Pfam Protein phosphatase 2C 169 361 IPR001932 -
Tpr6g3820 492 MobiDBLite consensus disorder prediction 474 492 - -
Tpr6g3820 492 ProSiteProfiles PPM-type phosphatase domain profile. 63 382 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3820 Tpr-Chr6 43279299 43283349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3820 1 478 PP2C-type Phosphatase Gene Family AT3G02750 60.566 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3820 - - cam:101510446 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0385 2 4577121 4580704 Tpr6g3820 6 43279299 43283349 PCT