Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3816 ATGGCTTCTTCACCAACTGACTCCAATCCACCATCCGCCGTTCCTCTCCCTCTCTCCTTACCTGCTCCACCACCACCACCACCACCAACAACAACAACCTCTTCCCGCCGTCTTCCTCCTCCTTGCTGGACACCAGAAGAAACATCTGCCTTAATCGATTCATATCGTGACAAATGGTATTCTCTTGGCCGTACGAATCTCAAAGCAATTCATTGGCAAGAAGTTGCTGACGCCGTTACCGCTAAGTGCCCTAACGCTTCACCGACACACAAAACCGCCGTTCAGTGCCGTCATAAAATGGAAAAATTACGTAAACGTTACCGATCTGAGATCCAACGGCTTAGATCTCTTCCTGTTCCCAGATCTCGTTCTTCTTCTTCTTGGGTTCATTTTAAATCTATGGATTCTATGGAAAAAGGTCCTTCTCCTCCGCCGATGAAAATTGAAAACCCTAATCATCTTAATCACCGTGAAACCCTAATTGATAACGATGATCTTGACGATGATGATCTTTACGAGGAACTTAGAAGTGCTGCTGGTGGTGGATCTGGAAATAGCAGGAGTATCAATAAACTCTACCGGAATGGAGTTTCTGGTGGTGGTGGTGGTCCTCCCGGTGGTGGTTTTCGTATCAGGATTCCGAGTGGCGTTAGCGTGGCGCAAACTTTCATCGGTAACCATCTTCAGAAAATGATTGATAACCGATCGGGTTCGGAATCTGGTTCTCGGATCAATGGCGGTGGAATGAGGCTTAATAAAGAGAGAGTTGGATTGGGGAAGAGAGAGAGGGAGAGAGAGGTAGAGAGAGAAAAAGATCCAATTGGTGAAATGGTGAATGCTATTAAGGTTTTGAGAGATGGGTTTGTGAGAATGGAGCAAATGAAAATGGAGATGGCTAGAGAGATTGAAACCATGCGTATGGAGATGGAGATGAAGCGTACTGAAATGATTCTTGAGTCTCAGCAGAAGATTGTTGAAGCTTTTGCGAAAGCAGTTTCGGAGAAGAACAAGAAGAGGAAACTGCATAAGGGTAATAGTAACAACAATAACAATAGCAACACCAATAACAACATAGCTTCACCCTCAGAATCGTAG 1095 0.4502 MASSPTDSNPPSAVPLPLSLPAPPPPPPPTTTTSSRRLPPPCWTPEETSALIDSYRDKWYSLGRTNLKAIHWQEVADAVTAKCPNASPTHKTAVQCRHKMEKLRKRYRSEIQRLRSLPVPRSRSSSSWVHFKSMDSMEKGPSPPPMKIENPNHLNHRETLIDNDDLDDDDLYEELRSAAGGGSGNSRSINKLYRNGVSGGGGGPPGGGFRIRIPSGVSVAQTFIGNHLQKMIDNRSGSESGSRINGGGMRLNKERVGLGKREREREVEREKDPIGEMVNAIKVLRDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQKIVEAFAKAVSEKNKKRKLHKGNSNNNNNSNTNNNIASPSES* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3816 364 MobiDBLite consensus disorder prediction 334 364 - -
Tpr6g3816 364 MobiDBLite consensus disorder prediction 1 42 - -
Tpr6g3816 364 PANTHER TRANSCRIPTION FACTOR 5 342 - -
Tpr6g3816 364 Pfam Myb/SANT-like DNA-binding domain 41 137 IPR044822 -
Tpr6g3816 364 Gene3D - 43 109 - -
Tpr6g3816 364 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 342 IPR044823 -
Tpr6g3816 364 MobiDBLite consensus disorder prediction 345 364 - -
Tpr6g3816 364 Coils Coil 97 117 - -
Tpr6g3816 364 MobiDBLite consensus disorder prediction 10 35 - -
Tpr6g3816 364 SMART 118neu2 50 142 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3816 Tpr-Chr6 43077065 43078159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3816 42 137 Trihelix Transcription Factor Family AT3G14180 31.250 4.95e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr6g3816 Myb_DNA-bind_4 7.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3816 - - cam:101501151 433.721