Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3792 ATGGTTTTGAGTAGTAGAATTTTCAATACTCATGTTATTGTTAGTTTCTTTCTGCTGATTAGTTGTAGTATGACCTATGGTACTGATAGTGACATCTTCTGCTTAAAAAGCATACACGAATCGCTAAAAGACCCAAACAATTATCTGGAAAATTGGAATTTCGACAACAAAACTGAAGGGTTTCTTTGCAAGTTTACTGGTGTTGAATGTTGGCACCCTGATGAGAATAGGGTTTTGAATCTCAAACTTCCTAATATGGGACTCAAGGGCGAGTTTCCTCGAGGAATTCGTAATTGCTCGAGTTTAACAGGATTAGATTTTTCATTAAACAGCCTCTCTAAAGCCATTCCAGATGATATATCTAATCTACTCAACTTTGTGGTCACTCTTGATCTATCTTCAAATGATTTCACCGGAGTGATACCTTTGTCGCTTGCTAATTGTACCTATCTTAATAGTCTTAAACTTGACCGGAACCAACTTACCGGTCAAATTCCTCTGGAATTTGCTTCGCTCACGCGGCTTAAGATGTTTACTGTTTCAAATAATCTTTTGACGGGCCAAGTTCCAAATTTTGGAAAAAATGTAGCAATTACGGAGGCTGATTATGCAAATAATTCAGCACTCTGCGGACCGCCCTTGAAGGCTTGCACGGCATCTTCAAAGACTAACACTGCGGTTATAGCTGGTGCAGCTGTTGGTGGTGTGACTCTTGCAGCATTAGGAGTGGCTGTTGGATTGTTCTTCTATGTGCGCCGTGTTTCACACAGGAAAAAGGAAGAAGATCCTGAAGGAAACAAGTGGGCACGAATCCTAAAGGGAACCAAGAAAATAAAGGTTTCAATGTTTGAGAAGTCAATTTCAAAAATGAACTTGAGTGATCTCATGAAGGCTACTAATAACTTCAGCAAAAGCAATGTTATTGGGACTGGAAGATCAGGAACTGTTTACAAAGCTGTCCTTGACGACGGCACATCACTCATGGTTAAGCGATTACAGGAATCTCAACACTCGGAGCAAGAATTTACTGCCGAGATGGCTACACTAGGAACAGTTAGACATCGTAACTTGGTTCCTCTTTTAGGTTTTTGCCTCGCCAAAAAGGAGAGACTTTTGGTCTATAAAAATATGCCGAATGGCACTCTTCATGATCAATTACATCCTGATGCTGGCGAGTGTACTATGGAGTGGTCTATAAGGCTCAAAATCGCAATCGGAGCTGCCAAAGGATTTGCATGGCTTCATCACAACTGCAATCCTCGTATTATCCACCGAAACATAAGCTCTAAGTGCATCATGTTGGACACAGATTTTGAGCCAAAAATATCCGATTTTGGCCTTGCTAGATTGATGAACCCGATTGATACACATTTGAGTACTTTTGTAAATGGTGAGTTTGGTGATTTAGGTTATGTTGCTCCCGAGTATACAACAACTTTGGTGGCTACTCCTAAGGGAGATGTTTATAGCTTTGGAACTGTGCTACTTGAGTTGGTGACAGGTGAAAGACCTACTCATGTAGCGAAAGCTCCAGAAACATTTAAAGGAAATTTGGTAGAATGGATCATGCAGCTCTCAGTCAACTCTAGCCTAAAAGACGCAATCGATGAATCATTAGTTGGGAAGGGTGTTGATCATGAACTTTTTCAGTTTCTCAAGGTTGCATGCAACTGTGTTACTTCAACTCCAAAGGAGAGGCCTACTATGTTTGAAGTATATCAGTTTCTAAGAGAAATTGGGAGTAGATATAATTTCATAACTGAGGATGAGATAATGGTACTTACAGATGATGGCAATGCTGGTAAGTTGGAAGAACTTATTGTAGCGCGATAG 1833 0.4032 MVLSSRIFNTHVIVSFFLLISCSMTYGTDSDIFCLKSIHESLKDPNNYLENWNFDNKTEGFLCKFTGVECWHPDENRVLNLKLPNMGLKGEFPRGIRNCSSLTGLDFSLNSLSKAIPDDISNLLNFVVTLDLSSNDFTGVIPLSLANCTYLNSLKLDRNQLTGQIPLEFASLTRLKMFTVSNNLLTGQVPNFGKNVAITEADYANNSALCGPPLKACTASSKTNTAVIAGAAVGGVTLAALGVAVGLFFYVRRVSHRKKEEDPEGNKWARILKGTKKIKVSMFEKSISKMNLSDLMKATNNFSKSNVIGTGRSGTVYKAVLDDGTSLMVKRLQESQHSEQEFTAEMATLGTVRHRNLVPLLGFCLAKKERLLVYKNMPNGTLHDQLHPDAGECTMEWSIRLKIAIGAAKGFAWLHHNCNPRIIHRNISSKCIMLDTDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTTTLVATPKGDVYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWIMQLSVNSSLKDAIDESLVGKGVDHELFQFLKVACNCVTSTPKERPTMFEVYQFLREIGSRYNFITEDEIMVLTDDGNAGKLEELIVAR* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3792 610 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
Tpr6g3792 610 ProSiteProfiles Protein kinase domain profile. 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3792 610 PANTHER LRR RECEPTOR-LIKE KINASE 5 589 - -
Tpr6g3792 610 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Tpr6g3792 610 SUPERFAMILY L domain-like 29 207 - -
Tpr6g3792 610 Gene3D Phosphorylase Kinase; domain 1 263 375 - -
Tpr6g3792 610 Gene3D Ribonuclease Inhibitor 29 91 IPR032675 -
Tpr6g3792 610 Gene3D Ribonuclease Inhibitor 92 226 IPR032675 -
Tpr6g3792 610 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Tpr6g3792 610 CDD STKc_IRAK 308 579 - -
Tpr6g3792 610 PANTHER RECEPTOR-LIKE PROTEIN 55 5 589 - -
Tpr6g3792 610 Pfam Protein kinase domain 303 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3792 610 CDD TM_EGFR-like 220 259 - -
Tpr6g3792 610 Gene3D Transferase(Phosphotransferase) domain 1 377 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3792 Tpr-Chr6 42547886 42551797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3792 17 597 Receptor kinase-like Gene Family AT3G28450 45.826 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Tpr6g3792 Pkinase 7.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3792 - - gmx:100817267 949.118