LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g3778	ATGGGTGGTTCCCTATTTTCTCTTCATCGCATTATGGTTTCGTTACTTTTCATTTTCATGTTCTTGCTAGAAGCCGTCCATGGCACAAAAAAGTGTTACATTGTATACTTGGGAGCACATTCTCATGGCCCTCACCCTACATCTGTTGAACTTGATATTGCTACCAATTCTCATTATGATTTACTAAGTTCAACTTTGGGAAGCCGGGAGAAAGCAAAAGAAGCAATCATTTACTCATATAACAAACATATCAATGGCTTTGCCGCCTTACTTGAAGAAGAAGAAGCAGCAGATATTTCAAAAAAAGCAAATGTAGTGTCAGTGTTCTTGAGCAAATCTCATAAACTGCACACAACAAGGTCATGGGAATTTCTTGGACTGCAAAGAAATGGTAAGAACACTGCATGGCAAAAGGGAAAGTTTGGTGAAAATACAATAATCGCAAACATCGACTCCGGTGTTTGGCCGGAATCCAAGAGCTTCGGTGATAAGGGATTTGGACCTATTCCATCTAAATGGCGTGGGACAAATGCGTGTCAAATTAGACAATTCCGCAAATTGAAGAAAAATCCTTGCAACAGGAAGCTAATCGGAGCCAGATTCTTCAGCAATGCTTATGAAGCATATTATGGAAAGCTTCGCTCATGGCAACTTAGCGCACGTGACTTTGTAGGACACGGTACTCATACACTATCAACAGCAGGTGGAAACTTCGTACCAGGTGCAAGTATATTCGGTATTGGCAATGGTACCATAAAAGGTGGTTCACCTAGAGCTAGAGTTGCCACATACAAAGTGTGCTGGTCTCTAACAGATGTTGCTGACTGCTTTGGAGCCGACGTGTTAGCTGCTATTGACCAAGCCATTAGTGATGGTGTTGATATATTATCACTTTCAGTTGCTGGCCAATATCTTGTCTATCCTGAAGATATTTTCACAGATGAGGTTTCAATAGGTGCATTCCATGCACTTTCTAGAAACATATTAGTAGTTGCCTCTGCAGGGAACGATGGACCAACCGAAGGAAGCGTGGTGAATATAGCTCCATGGGTATTCACAATTGCTGCTAGTACATTAGACAGAGACTTCAGCAGTACAATAACTATTGGTAACAAAAAAGTCACGGGAGCTAGTCTTTTTGTAACCTTACCGCCTAATAAGTCGTTTTCTCTGATTCTTGGTACGGATGGTAAACTTGCCAATGCGACAGATCGTGCTGCGCGACTTTGTAGGCCCGGAACACTTGATCCTTCAAAAGTGAAGGGCAAAATAGTGGGATGTGATCGAGAAGGAAATATAAAATCAGTTGCTGAGGGTCAGGAAGCTTTATCAGCAGGTGCCAAGGGAATGCTTTTGAGCAATCGACCACAACAAGGGAAAACAACTCTTGCTGAGCCTCATGTTTTGTCTTGTGTGGGTAACGGGCAAGATGAAAACACTCCAGTTATTATCAATACAACAGAACCTGCAGGGTCACATGCTGCTTATGACATAACTTCCATGGACTCTAAATTAAAGTCGGGTACCACAATAAGGTTTTCAGGAGCAAAAGTATTGTATGGAAGAAAGCCAGCTCCAGTAATGGCTTCATTCTCATCTAGAGGACCAAATAAGATTCAGCCGTCAATACTCAAGCCTGATGTAACTGCACCAGGTGTGAACATACTTGCTGCCTACTCATTGTTCGCAAGTGCTTCCAACTTAATAACAGACAATCGCCGAGGTTTTCCATACAATGTACAACAAGGAACTTCTATGTCTTGCCCTCATGTGGCCGGCATTGCAGGACTTCTCAAAACAAAGCATCCTAATTGGAGTCCAGCAGCTATTAAATCGGCTATCATGACCACAGCAACCACACTAGATAACACAAACAGACCAATTCAAGATGCATTTAAAAAAAAACTAGCAACTCCCTTTGCTTATGGTTCAGGGCATGTTCAACCTGACCTTGCAATAGATCCTGGACTTGTTTATGATCTAGGCATTAAGGATTACTTGAATTTCCTATGTGCTTATGGATACAACCAACAACTCATTTCAGCACTTAATTTCAATGGTACATTTGTTTGTTCCGGATCTCACAGCATAGAAGACTTTAACTACCCTTCAATCACGTTACCGAATCTTGGGTTAAATGTCGTTAATGTCACTCGGACGGTCACCAATGTTGGGTCACCCGGCACATATGTAGCAAAAGCCCAATTGCCTGGATATAAAATTGTCGTTGTACCAAACTCCTTGACTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTGTGCAGGCAACAAATGGGACTCCACGGAAGAAATATCAATTTGGAAATTTGCAATGGACAGATGGAAAACACATTGTAAGGAGTCCTATCACCGTTAAGCGCAAATAA	2394	0.4165	MGGSLFSLHRIMVSLLFIFMFLLEAVHGTKKCYIVYLGAHSHGPHPTSVELDIATNSHYDLLSSTLGSREKAKEAIIYSYNKHINGFAALLEEEEAADISKKANVVSVFLSKSHKLHTTRSWEFLGLQRNGKNTAWQKGKFGENTIIANIDSGVWPESKSFGDKGFGPIPSKWRGTNACQIRQFRKLKKNPCNRKLIGARFFSNAYEAYYGKLRSWQLSARDFVGHGTHTLSTAGGNFVPGASIFGIGNGTIKGGSPRARVATYKVCWSLTDVADCFGADVLAAIDQAISDGVDILSLSVAGQYLVYPEDIFTDEVSIGAFHALSRNILVVASAGNDGPTEGSVVNIAPWVFTIAASTLDRDFSSTITIGNKKVTGASLFVTLPPNKSFSLILGTDGKLANATDRAARLCRPGTLDPSKVKGKIVGCDREGNIKSVAEGQEALSAGAKGMLLSNRPQQGKTTLAEPHVLSCVGNGQDENTPVIINTTEPAGSHAAYDITSMDSKLKSGTTIRFSGAKVLYGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLITDNRRGFPYNVQQGTSMSCPHVAGIAGLLKTKHPNWSPAAIKSAIMTTATTLDNTNRPIQDAFKKKLATPFAYGSGHVQPDLAIDPGLVYDLGIKDYLNFLCAYGYNQQLISALNFNGTFVCSGSHSIEDFNYPSITLPNLGLNVVNVTRTVTNVGSPGTYVAKAQLPGYKIVVVPNSLTFKKIGEKKTFQVIVQATNGTPRKKYQFGNLQWTDGKHIVRSPITVKRK*	798

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g3778	797	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	20	796	IPR045051	-
	Tpr6g3778	797	Gene3D	Peptidase S8/S53 domain	145	666	IPR036852	GO:0004252\|GO:0006508
	Tpr6g3778	797	PANTHER	SUBTILISIN-LIKE PROTEASE GLYMA18G48580	20	796	-	-
	Tpr6g3778	797	CDD	Peptidases_S8_3	114	619	IPR034197	-
	Tpr6g3778	797	Gene3D	-	360	520	-	-
	Tpr6g3778	797	Pfam	Fibronectin type-III domain	699	794	IPR041469	-
	Tpr6g3778	797	Pfam	Peptidase inhibitor I9	33	117	IPR010259	-
	Tpr6g3778	797	ProSitePatterns	Serine proteases, subtilase family, serine active site.	583	593	IPR023828	-
	Tpr6g3778	797	SUPERFAMILY	Subtilisin-like	116	657	IPR036852	GO:0004252\|GO:0006508
	Tpr6g3778	797	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	23	117	IPR037045	-
	Tpr6g3778	797	Gene3D	-	670	796	-	-
	Tpr6g3778	797	ProSiteProfiles	Serine proteases, subtilase domain profile.	121	653	-	-
	Tpr6g3778	797	CDD	PA_subtilisin_like	366	472	-	-
	Tpr6g3778	797	Pfam	Subtilase family	142	624	IPR000209	GO:0006508\|GO:0008236
	Tpr6g3778	797	PRINTS	Subtilisin serine protease family (S8) signature	142	161	IPR015500	-
	Tpr6g3778	797	PRINTS	Subtilisin serine protease family (S8) signature	222	235	IPR015500	-
	Tpr6g3778	797	PRINTS	Subtilisin serine protease family (S8) signature	582	598	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g3778	Tpr-Chr6	42310756	42316805	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g3778	33	795	Subtilisin-like Serine Gene Family	AT2G04160	52.073	0.0	738

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g3778	-		-	gmx:100813564	1179.85