Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3776 ATGGGTCGCTCCATATTTCGTCTTCCTCACCTTTTTTCATCTCTTCTTATTTTCACTTTGTTGCTCAATCATGTTCATGCTAGCAAAAAGTGTTACATTGTATACTTGGGAGCACATTTACATGGTCCAACCCCTTCCACTGCTGACCTTGAAATTGCTACATCTTCACATTATGATTTATTGGGTTCAATCTTGGGAAGTGAAGAGAAGGCCAAAGAAGCAATAATTTATTCATATAATAAACAGATCAATGGGTTTGCAGCTATACTTGAAGAGGAAGAAGCTGCACAAATTGAAAAAAACCCGAAGGTTGTATCTGTGTTCTTGAGTAAAAAACATAAATTGCACACTACACGTTCATGGGAATTTCTTGGATTGCGTGGAAATGATATGAACTCAGCTTGGCAAAAGGGAAGGTTTGGTGAAAATACCATCATAGCTAACATTGATACAGGTGTTTGGCCCGAATCGAAGAGTTTTAGCGACAGAGGAATAGGCCCAATTCCAGCAAAATGGCGTGGGGGTAACATTTGTCAAATTAACAAACTCAATGGTTCTAATTCTAACAAAGTTCCATGTAACAGGAAGCTAATTGGAGCTAGATTTTTCAACAAAGAATATGAGCGCAATAACGGCAAACTTCCTCGTTCACAACAAACAGCACGTGACTTTGTAGGCCATGGTACTCACACCCTATCAACTGCCGGTGGAAATTTCGTACCAGGTGCAAGCATATTTGGTATTGGTAATGGTACTATAAAAGGTGGTTCACCAAGATCAAGGATTGCAACATACAAAGTGTGTTGGTCTCTAACAGATCCTGATAGTTGCTATGGTGCTGATGTATTAGCCGCTATTGAGCAAGCCATTAATGATGGTGTTGATTTAATTTCAGTTTCAATTAGTGGCAGTATTAGTACAAATTCTAAAGAAATATTTAACGATCCGATTTCAATAGGTGCATTTCATGCACTTGCTAGAAATATATTATTGGTTGCTTCAGCTGGAAATGACGGACCTACCCCTGAAAGTGTTGTTAATGTTGCTCCTTGGGTGTTCACAGTTGCTGCTAGTACAATTGATAGAGACTTCAGCAGTACCATCACCCTTGGCAACCAAACAGTCAGGGGAGCAAGTCTTTTTGTAAACTTGCCACCTAATCAGTCTTTTACTGTAGTGACTTCTATCGATGGTAAATTTGCCAATGCAACAAATCGAGATGCTCGATTTTGTAGACCGGGAACACTTGATCCTGCAAAAGTGAATGGTAAAATAGTGGCGTGTGTTCGTGAAGGGAAAATAAGATCAGTTGCTGAGGGTCAAGAAGCTTTATCTGCAGGCGCAAAGGGAGTGATTTTAGAAAATCAACCTAAAATTAGTGGGAGAACACTTCTTTCTGAGCCTCATGTTTTGTCTACTGTTGGGTATAGCGAAGAAAAACGAAGAACAACAAAACATGGTTTAAGCACAACTGCCAAGTCAGGTACTAAAATAAGATTGTCCCAAGCAAAAGTCTTATACGGAAGAAAGCCAGCTCCAGTTATGGCTTCATACTCATCTAGAGGACCAAATAAAATTCAACCATCAATACTTAAGCCTGATGTAACTGCGCCAGGTGTGAACATACTTGCTGCCTATTCATTATTTGCAAGTGCATCTAATTTAATTACCGACACTCGTCGAGGGTTTCCATTCAATGTCATGCAAGGAACATCAATGGCTTGTCCTCATGTCACTGGCACTGCCGGACTTATCAAAACACTTCATCCTAATTGGAGTCCAGCAGCTATTAAATCGGCTATCATGACCACCGCAACCACAAGAGATAACACCAAGAAGCCAATAAGTGATGCATTTGATAAAACACTAGCAACTCCATTTGCATATGGTTCAGGACACATTCAACCCAACAGTGCAATAGATCCAGGACTTGTTTATGATCTAACCATTATTGATTACTTAAACTTCTTATGTGCTTCTGGATTTAACCAAAAACTCATCTCAAAACTTAATTTCAATAAGACATTTAGATGTTCAGGGTCACATAGCATAAATGACTTGAATTATCCTTCAATCACATTACCAAATCTTGGATTAAGTGTTGTTAATGTGACTAGGACAGTTACCAATGTTGGGCCACCAAGTACATATTTTGTAATAGCCCAATTGCCTGGATATAAAATTGTTGTTGTACCAAATTCCTTGAATTTCAAGAAAATTGGTGAAAAGAAGACATTTCAAGTTGTAATTCAAGCAACAAGTGTGACTCGAAGGAAGAAATACCGATTTGGTGAATTGAAATGGACAAATGGAAAACACATTGTTAGGAGTCCCATTACTGTTTGGCGCAAATGA 2355 0.3885 MGRSIFRLPHLFSSLLIFTLLLNHVHASKKCYIVYLGAHLHGPTPSTADLEIATSSHYDLLGSILGSEEKAKEAIIYSYNKQINGFAAILEEEEAAQIEKNPKVVSVFLSKKHKLHTTRSWEFLGLRGNDMNSAWQKGRFGENTIIANIDTGVWPESKSFSDRGIGPIPAKWRGGNICQINKLNGSNSNKVPCNRKLIGARFFNKEYERNNGKLPRSQQTARDFVGHGTHTLSTAGGNFVPGASIFGIGNGTIKGGSPRSRIATYKVCWSLTDPDSCYGADVLAAIEQAINDGVDLISVSISGSISTNSKEIFNDPISIGAFHALARNILLVASAGNDGPTPESVVNVAPWVFTVAASTIDRDFSSTITLGNQTVRGASLFVNLPPNQSFTVVTSIDGKFANATNRDARFCRPGTLDPAKVNGKIVACVREGKIRSVAEGQEALSAGAKGVILENQPKISGRTLLSEPHVLSTVGYSEEKRRTTKHGLSTTAKSGTKIRLSQAKVLYGRKPAPVMASYSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLITDTRRGFPFNVMQGTSMACPHVTGTAGLIKTLHPNWSPAAIKSAIMTTATTRDNTKKPISDAFDKTLATPFAYGSGHIQPNSAIDPGLVYDLTIIDYLNFLCASGFNQKLISKLNFNKTFRCSGSHSINDLNYPSITLPNLGLSVVNVTRTVTNVGPPSTYFVIAQLPGYKIVVVPNSLNFKKIGEKKTFQVVIQATSVTRRKKYRFGELKWTNGKHIVRSPITVWRK* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3776 784 Pfam Fibronectin type-III domain 686 781 IPR041469 -
Tpr6g3776 784 Gene3D Peptidase S8/S53 domain 144 653 IPR036852 GO:0004252|GO:0006508
Tpr6g3776 784 Gene3D - 361 507 - -
Tpr6g3776 784 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Tpr6g3776 784 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Tpr6g3776 784 PRINTS Subtilisin serine protease family (S8) signature 569 585 IPR015500 -
Tpr6g3776 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 782 IPR045051 -
Tpr6g3776 784 SUPERFAMILY Subtilisin-like 115 644 IPR036852 GO:0004252|GO:0006508
Tpr6g3776 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 570 580 IPR023828 -
Tpr6g3776 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 116 IPR037045 -
Tpr6g3776 784 CDD Peptidases_S8_3 113 606 IPR034197 -
Tpr6g3776 784 ProSiteProfiles Serine proteases, subtilase domain profile. 120 640 - -
Tpr6g3776 784 Gene3D - 657 783 - -
Tpr6g3776 784 CDD PA_subtilisin_like 367 481 - -
Tpr6g3776 784 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 782 - -
Tpr6g3776 784 Pfam Subtilase family 141 610 IPR000209 GO:0006508|GO:0008236
Tpr6g3776 784 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3776 Tpr-Chr6 42284033 42291548 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3776 24 781 Subtilisin-like Serine Gene Family AT2G04160 51.239 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3776 - - gmx:100803751 1224.15