Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3775 ATGGCACCACCACCCACACTTATCATGATTCTATCAACCTTGCAAATTCTGTTCATTATTCTCTCAGTCCTCCCAACACTCTCATGTTCACAAGCTGAAGCAACTGAATCACAAGCTTTGTTAAAATGGAAAAATAGCTTTGATAACCAAAGTCAAACAGTCTTATCAACTTGGAAAAATACCACAAATCCATGCAATTGGCAAGGAATTACTTGTGATAAAAAATCCAAATCAATTTCTACCATAAACCTTGAAAATTTAGGACTAAAAGGTACACTCCACTCTCTCACTTTTTCTTCATTACCAAACCTTAACACCTTAAATATCTATAATAACCAATTTTATGGAACCATTCCCCCACAAATTGGTAACATGTCAAAAATAAATGTTTTGAACTTTTCTGAAAATCCTTTTGTTGGTTCCATCCCCCAAGAAATGTGGAAATTGAAGAGTTTAAAAGGCCTTGATTTTTATAAATGTAAACTAAGTGGATCAATTCCTAGTTCCATAGGAAATTTATCCAACCTATCATATCTAGATTTAAGTAAAAACAATTGGTCTGGTCCTATTCCTCCTGAGATTGGAAAATTGAACAAATTAGAGTTCCTTCAAATTCTAAGAGGTAACCTAATTGGTTCCATTCCACAAGAAATCGGTTTGTTGACAAAACTTACTCATCTTGATTTGTCAACAAACTCTCTATCTGGTGTTATCCCTGAAACAATAGGCAACATGAGAAACCTAAATGGACTTCACCTTAATGATAACAAAGAGATATCTGGGTCAATTCCACACTCCTTGTGGAACATGTCTAGCTTGACCGATATCTACCTCTATAACATGAATCTTTCTGGTTCAATCCCTGATTCTATACAAAACTTGGTTAGTTTGTATTTCCTTTCACTTGATTTCAATCAACTTTCTGGATCCATTCCTTCCACAATTGGAAACATGAAAAACCTCACTGATTTGTATTTGGGAATGAATCGTCTTTCTGGATCAATTCCAGCTTCTATAGGAAATTTGATCAATTTGCAAACCTTTAGTGTCCAAAAAAACAATCTCTCTGGTACTATTCCTGCTACAATTGGGAATTTGAAACTGCTCACTGTCTTTGAAGTAGCTACCAATAAACTTCATGGTAGAATTCCAGATGGACTTTATAACATTACTGATTGGTATTCCTTTGTTGTGTCTGAGAATGATTTTGTTGGGCATTTGCCGCCGAAAATATGTTCTGGTGGAAAATTATATAACTTTAATGCTGATCAAAACCGTTTCACCGGTCCGGTACCAACAAGTTTGAAAGACTGCCCTACCGTTGAAAGAATCAGAATTGACGGAAATTCGATAGAAGGTGATATAGCACGAGATTTTGGTGTGTATCCGTTATTGAAATACATTGATATGAGTGACAATAAACTTCATGGACACATTTCACCAAACTGGGGGAAGTCTCTTGATCTTGATACTTTCAAGATATCCAACAATAATGTTTCGGGTGGTATACCGTTGGAGCTTATTGGTTTACCCAAGCTAGGTAGGCTTCATCTTTCTTCAAATCAATTGACCGGGAAACTTCCAAAGGAATTAGGGGACATGAAATCATTAGTAGAACTCAAGATAAGTAACAATCATTTCACAGATAGCATCCCAGTAGAAATTGGATTACTTCAAAGACTTGAAGAGTTGGATATCGGAGGAAATGAGTTGAGTGGCACAATACCGGAAGAAGTTGTGAAGCTACCAAGGTTACGAAACTTGAATTTGAGCAGGAACAAAATTGAAGGAAGTATTCCTTCTCAGTTTCGTTCAGCTCTTGAGTCACTTGATCTTAGTGGCAATTTTTTGAATGGGAAAATACCAACAGCTCTTGAAAACTTGGGGATGTTATCCATGTTGAATCTCTCACACAATATGCTTTCAGGAACCATTCCTCAAAATTTTGGAAGGAATTTGGTTTTTGTTAATATATCAGACAACAAGTTAGAAGGTCCACTTCCGAAAATTCCGGCTTTTATGAATGCTTCATCTGAATCATTCAAAAATAACAAAGACTTATGCGGAAATATCAAAGGTTTGGATTCTTGTCCCACAAGCCATAGCAAAAATGTCCTCCAAATCATATTCATTGCACTAGGAGCTCTTATATTAGTGTTGTCTGGTGTTGGAATTTCGATGTATATTTTGTGTCGAAGACAAAAACCAAATGAAGAAAGCCAAATTGAAGAAGCACAAAGGGGAGTACTATTTTCCGTCTGGAGTTATGATGGGAAAATGATGTTTGAAAATATCATTGAAGCAACTGAGAATTTTGATGACAAATATCTCATTGGAGTAGGAAGTCAAGGAAATGTTTACAAGGCAGAATTGTCTCCAGATATGGTGGTTGCGGTGAAGAAACTTCATTTAGTATCAGATGAAGATATGTCAACTTTCAGTTCAAAGTCTTTTATGAGTGAGATTGAAACGTTAACAGGAATCAAACACAGGAACATCATAAAGCTTTATGGATTTTGCTCACATTCTAAGTTTTCATTTTTAGTTTACAAGTTCTTGGAAGGCGGAAGCTTAGATCGTATACTAAACAATGACACATACGCCTCCGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCCAATGGTTTGTCCTATTTGCATCATGATTGTTCACCTCCTATTATTCATCGTGATATATCGAGCAAAAATGTTCTTCTTAATCTTGACTATGAAGCTCATGTCTCCGACTTTGGGACCGCTAAGTTTCTAAAGCCTGGTTTACTCAGTTGGACCCAATTTGCAGGCACTTTTGGCTATGCAGCTCCAGAGTTGGCACAAACAATGGAAGTGAATGAGAAATGTGATGTATACAGCTTTGGAGTACTTGCTCTGGAAATCATAATGGGAAAACATCCTGGAGATCTCATTTCATTATTTTTGTCATCATCTACAAGGCCAATGGCAAATGATATGTTGTTGATAGATATTTTAGATCAACGACCTCAACAAGTTATGAAACCAATTGATGAGGAGGTGATGTTGATTACCAGTTTGGCATTTGCTTGCTTGAGTCAAAATCCGCGTTCTCGTCCAACCATGGAACAAGTATCTAAGATGCTTGCAGCAGGAAAATCACCTTTTAAGAACCAACTTTCCATGATTAGACTAGGACAACTTCAATAA 3195 0.3656 MAPPPTLIMILSTLQILFIILSVLPTLSCSQAEATESQALLKWKNSFDNQSQTVLSTWKNTTNPCNWQGITCDKKSKSISTINLENLGLKGTLHSLTFSSLPNLNTLNIYNNQFYGTIPPQIGNMSKINVLNFSENPFVGSIPQEMWKLKSLKGLDFYKCKLSGSIPSSIGNLSNLSYLDLSKNNWSGPIPPEIGKLNKLEFLQILRGNLIGSIPQEIGLLTKLTHLDLSTNSLSGVIPETIGNMRNLNGLHLNDNKEISGSIPHSLWNMSSLTDIYLYNMNLSGSIPDSIQNLVSLYFLSLDFNQLSGSIPSTIGNMKNLTDLYLGMNRLSGSIPASIGNLINLQTFSVQKNNLSGTIPATIGNLKLLTVFEVATNKLHGRIPDGLYNITDWYSFVVSENDFVGHLPPKICSGGKLYNFNADQNRFTGPVPTSLKDCPTVERIRIDGNSIEGDIARDFGVYPLLKYIDMSDNKLHGHISPNWGKSLDLDTFKISNNNVSGGIPLELIGLPKLGRLHLSSNQLTGKLPKELGDMKSLVELKISNNHFTDSIPVEIGLLQRLEELDIGGNELSGTIPEEVVKLPRLRNLNLSRNKIEGSIPSQFRSALESLDLSGNFLNGKIPTALENLGMLSMLNLSHNMLSGTIPQNFGRNLVFVNISDNKLEGPLPKIPAFMNASSESFKNNKDLCGNIKGLDSCPTSHSKNVLQIIFIALGALILVLSGVGISMYILCRRQKPNEESQIEEAQRGVLFSVWSYDGKMMFENIIEATENFDDKYLIGVGSQGNVYKAELSPDMVVAVKKLHLVSDEDMSTFSSKSFMSEIETLTGIKHRNIIKLYGFCSHSKFSFLVYKFLEGGSLDRILNNDTYASAFDWEKRVNVVKGVANGLSYLHHDCSPPIIHRDISSKNVLLNLDYEAHVSDFGTAKFLKPGLLSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPGDLISLFLSSSTRPMANDMLLIDILDQRPQQVMKPIDEEVMLITSLAFACLSQNPRSRPTMEQVSKMLAAGKSPFKNQLSMIRLGQLQ* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3775 1064 Pfam Protein kinase domain 774 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3775 1064 Gene3D Transferase(Phosphotransferase) domain 1 853 1057 - -
Tpr6g3775 1064 Gene3D Ribonuclease Inhibitor 416 705 IPR032675 -
Tpr6g3775 1064 Gene3D Ribonuclease Inhibitor 148 219 IPR032675 -
Tpr6g3775 1064 Gene3D Ribonuclease Inhibitor 35 147 IPR032675 -
Tpr6g3775 1064 ProSitePatterns Tyrosine protein kinases specific active-site signature. 898 910 IPR008266 GO:0004672|GO:0006468
Tpr6g3775 1064 SUPERFAMILY RNI-like 353 665 - -
Tpr6g3775 1064 SUPERFAMILY Protein kinase-like (PK-like) 757 1044 IPR011009 -
Tpr6g3775 1064 SUPERFAMILY RNI-like 82 389 - -
Tpr6g3775 1064 Gene3D Phosphorylase Kinase; domain 1 732 852 - -
Tpr6g3775 1064 Pfam Leucine rich repeat 583 641 IPR001611 GO:0005515
Tpr6g3775 1064 Pfam Leucine rich repeat 223 280 IPR001611 GO:0005515
Tpr6g3775 1064 ProSiteProfiles Protein kinase domain profile. 772 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3775 1064 SMART LRR_typ_2 294 318 IPR003591 -
Tpr6g3775 1064 SMART LRR_typ_2 558 581 IPR003591 -
Tpr6g3775 1064 SMART LRR_typ_2 510 534 IPR003591 -
Tpr6g3775 1064 SMART LRR_typ_2 221 244 IPR003591 -
Tpr6g3775 1064 SMART LRR_typ_2 582 605 IPR003591 -
Tpr6g3775 1064 SMART LRR_typ_2 342 366 IPR003591 -
Tpr6g3775 1064 SMART LRR_typ_2 628 652 IPR003591 -
Tpr6g3775 1064 SMART LRR_typ_2 173 197 IPR003591 -
Tpr6g3775 1064 SMART LRR_typ_2 101 125 IPR003591 -
Tpr6g3775 1064 Gene3D Ribonuclease Inhibitor 221 396 IPR032675 -
Tpr6g3775 1064 PRINTS Leucine-rich repeat signature 224 237 - -
Tpr6g3775 1064 PRINTS Leucine-rich repeat signature 582 595 - -
Tpr6g3775 1064 SMART LRR_sd22_2 221 250 - -
Tpr6g3775 1064 SMART LRR_sd22_2 149 175 - -
Tpr6g3775 1064 SMART LRR_sd22_2 558 581 - -
Tpr6g3775 1064 SMART LRR_sd22_2 318 344 - -
Tpr6g3775 1064 SMART LRR_sd22_2 604 630 - -
Tpr6g3775 1064 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Tpr6g3775 1064 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 251 1063 - -
Tpr6g3775 1064 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 17 177 - -
Tpr6g3775 1064 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 158 257 - -
Tpr6g3775 1064 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 158 257 - -
Tpr6g3775 1064 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 17 177 - -
Tpr6g3775 1064 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 251 1063 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3775 Tpr-Chr6 42264962 42268688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3775 14 946 Receptor kinase-like Gene Family AT4G08850 43.592 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr6g3775 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3775 - - gmx:100815688 1331.62