Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3774 ATGATTCTCTCTAGCTGGCAAATTATGTTCATTATTCTCTCAGTCCTTCCAACACTCTCATGGTCACAAGCTGAATCACAAGCTTTGTTAAAATGGAAAAATAGCTTTGATAACCAAAGTCAAACACTCTTATCAACTTGGAAAAATACCACAAATCCATGCAAATGGCAAGGAATTACCTGTGATAAAAAATCCAATTCCATTTCTACCATAAACCTTGAAAACTTTGGACTAAAAGGTACACTTCACTCTCTTCCATTTTCTTCATTCCCAAACCTTATAACCATAAATATCTACAATAACCACTTTTATGGAACTATTCCACCACAAATAGGTAACATGTCAAAAATAAATGTGTTGAATTTTTCTTTAAACCCTTTTGATGGTTCCATTCCACAAGAAATGTGCACATTAAAAAGTTTACAAAAGCTTGATCTTTCTCAATGTAAACTAAGTGGATCAATTCCTAGTTCAATAGGAAATTTATCCAATTTATTATTTCTAGATTTAGGTACCAACAATTTTTCTGGTGGTCCTATTCCTCCTGAGATTGGAAAATTGAACAAATTAGGGTTTCTAGCAATTCCAAAAAGTAAATTAATTGGTTCAATTCCACAAGAAATTGGTTTCTTGAGAAATCTTATTTATCTTGATTTAACAAGAAATTCTTTAACTGGTGTTATACCTGAAACTATAGGTAATTTGAGCAAATTAGATACACTTATACTTTCTAATAACACCAAAATTTCAGGACCAATTCCACACTCTTTGTGGAATTTGTCTAGCTTGAGATTGATCTACTTTAACAACATGAGTCTTTCTGGATCAATTCCTGATTCTATACAAAACTTGGTTAATTTGGATACTCTTGCACTTGATATTAATCACCTTTCTGGAACCATTCCTTCTACAATTGGAAAGTTGAAAAAACTATATTCTTTGTATTTGGGAACAAATCGTTTTTCTGGATCGATTCCGGATTCTATAGGAGATTTGATAAATTTGGAAGACTTTAGTGTCCAAGAAAACAATCTTTCAGGAACTATTCCAGCTTCAATTGGAGATTTGAAGTGGCTCAATGTGTTTGAAGTAGCTACTAATAAACTTCATGGTAGAATTCCAGTTGGACTTTATAACATTACTAATTGGTATTCCTTTGTTGTGTCTGAGAATCAATTAGTTGGTCATTTGCCGCCGAAAATATGTTCTGGTGGACAATTAAGGTACTTGAATGCTGATCAAAACCATTTCACGGGTCCAGTACCAACAAGTTTGAAACACTGTGATACCATTGAAAGAATCAGAATTGAGGGAAATTTAATAGAAGGTGATATAGCACAAGATTTTGGTGTATATCCGAATTTACGATACCTTGATCTGAGTGACAATAAGTTTCATGGCCAAATTTCATCTAACTGGGGGAAGTCTCTTGATCTTGATACTTTCAAGATATCCAACAACAATGTTTCTGGTGGTATACCATTGGATTTTATTGGTTTAACCAAGCTAGGTAGACTTCATCTTTCTTCGAATCAATTGACCGGGAAACTTCCGAAGGAATTAGGAGACATAAAATCATTAGTGGAACTTAAGATAAGTAACAATCATTTTACAGATAACATTCCAACAGAATTTGGATTGCTGCCAATACTTAATGAGTTGGATCTCGGAGGAAACGAGTTGAGTGGAACGATACCGATGGAAGTTGCAAAGCTACCAAGGTTACGAAGATTGAATTTGAGCAGAAACAAATTCGTAGGAAGTATTCCCGTGCAGTTTGGTTCAGATTTGGAATCACTTGATCTTAGTGGAAATTTTTTGAATGGAAAAATACCAACAACCCTTGAAAACTTGATGCAGTTGTCAATGCTGAATCTCTCACACAATATGCTTGCAGGAACCATTCCTCAAAATTTTGAAAGGAGTTTGGTTTTTGTTAATATATCAGACAACCGGTTAGAAGGGCCACTTCCGAAAATTCCAGCTTTTCTTAATGCTCCGTTTGAATCACTCAAAAATAACAAAGGCTTATGTGGAAATATCACAGGTTTGGTTCGTTGTGCAACAAACCATAGTAACAAGAGCAAAAATGTCCTCCGATCAGTATTCATTGCGTTAGCAGCTCTAATATTTGTGTTGTGCATGGTTGGAATTTCAATGTATATTTTGCGTCGAAGACAAAAACCAAAGGAAGAAAGCCAAACTGTAGAAGAAGCACAAAAAGGAGTACTCTTTTCAATTTGGAGTCATGATGGAAAAATGATGTTTGAAAATATAATTGAAGCTACTGAGAATTTTGATGATAAATATCTCATTGGAGTTGGAAGTCAAGGAAATGTCTACAAGGCAGAGTTGTCTGCAGGTACGGTTGTAGCTGTTAAGAAGCTTCATTTAGTAACAGATGAAGAAATGTCAACTTTCAGTTCAAAGTCTTTTAAGAGTGAGATTGAAACCTTGGCAGAAATCAAACACAGGAACATCATTAAACTTATTGGATTTTGCTCACATTCTAAGTTCTCATTTTTGGTTTACAACTTCTTGGAAGGTGGAAGCTTAGATCATATCCTAAACAATGACACACAAGCCACTGCGTTTGATTGGGAAAAGAGAGTGAATGTTGTTAAAGGTGTGACCAATGCTTTGTCCTACTTGCATCATGATTGCTCACCTCCAATTATTCACCGCGACATATCAAGCAAGAATGTCCTTCTTAATCTTGATTATGAAGCTCACGTCTCCGACTTCGGGACAGCAAAGTTTCTAAAGCCTGGTTTACTTAGTTGGACCCAATTTGCAGGCACTTTTGGATATGCAGCACCAGAGTTAGCACAAACAATGGAAGTGAATGAGAAATGTGATGTATACAGCTTTGGAGTACTTGCATTAGAAATCATAATGGGAAAACATCCGGGAGATCTCATTTCATTATTTTTGTCACCATCTACAAGGCCAATGGCTAATGATATGTTGCTGATGGATGTTTTAGATGAACGACCTCAACAAGTTATGAAACCGATTGATGAGGAGGTTATCTTGATTACAAAGTTGGCATTTGCTTGCTTGAGGCAAAATCCATGTTCTCGTCCAACAATGGAACAAGTATCTAAGATGCTTGCAGCAGAAAAATCACCTTTGGAGACTCAACTTTGCATGATCAGACTAGGACAACTTCAATAA 3177 0.3557 MILSSWQIMFIILSVLPTLSWSQAESQALLKWKNSFDNQSQTLLSTWKNTTNPCKWQGITCDKKSNSISTINLENFGLKGTLHSLPFSSFPNLITINIYNNHFYGTIPPQIGNMSKINVLNFSLNPFDGSIPQEMCTLKSLQKLDLSQCKLSGSIPSSIGNLSNLLFLDLGTNNFSGGPIPPEIGKLNKLGFLAIPKSKLIGSIPQEIGFLRNLIYLDLTRNSLTGVIPETIGNLSKLDTLILSNNTKISGPIPHSLWNLSSLRLIYFNNMSLSGSIPDSIQNLVNLDTLALDINHLSGTIPSTIGKLKKLYSLYLGTNRFSGSIPDSIGDLINLEDFSVQENNLSGTIPASIGDLKWLNVFEVATNKLHGRIPVGLYNITNWYSFVVSENQLVGHLPPKICSGGQLRYLNADQNHFTGPVPTSLKHCDTIERIRIEGNLIEGDIAQDFGVYPNLRYLDLSDNKFHGQISSNWGKSLDLDTFKISNNNVSGGIPLDFIGLTKLGRLHLSSNQLTGKLPKELGDIKSLVELKISNNHFTDNIPTEFGLLPILNELDLGGNELSGTIPMEVAKLPRLRRLNLSRNKFVGSIPVQFGSDLESLDLSGNFLNGKIPTTLENLMQLSMLNLSHNMLAGTIPQNFERSLVFVNISDNRLEGPLPKIPAFLNAPFESLKNNKGLCGNITGLVRCATNHSNKSKNVLRSVFIALAALIFVLCMVGISMYILRRRQKPKEESQTVEEAQKGVLFSIWSHDGKMMFENIIEATENFDDKYLIGVGSQGNVYKAELSAGTVVAVKKLHLVTDEEMSTFSSKSFKSEIETLAEIKHRNIIKLIGFCSHSKFSFLVYNFLEGGSLDHILNNDTQATAFDWEKRVNVVKGVTNALSYLHHDCSPPIIHRDISSKNVLLNLDYEAHVSDFGTAKFLKPGLLSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPGDLISLFLSPSTRPMANDMLLMDVLDERPQQVMKPIDEEVILITKLAFACLRQNPCSRPTMEQVSKMLAAEKSPLETQLCMIRLGQLQ* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3774 1058 SMART serkin_6 766 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3774 1058 Gene3D Ribonuclease Inhibitor 178 269 IPR032675 -
Tpr6g3774 1058 Gene3D Ribonuclease Inhibitor 22 177 IPR032675 -
Tpr6g3774 1058 Gene3D Ribonuclease Inhibitor 270 381 IPR032675 -
Tpr6g3774 1058 ProSiteProfiles Protein kinase domain profile. 766 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3774 1058 SUPERFAMILY RNI-like 339 656 - -
Tpr6g3774 1058 Pfam Leucine rich repeat 526 585 IPR001611 GO:0005515
Tpr6g3774 1058 Pfam Leucine rich repeat 212 267 IPR001611 GO:0005515
Tpr6g3774 1058 SUPERFAMILY RNI-like 71 347 - -
Tpr6g3774 1058 Pfam Protein kinase domain 768 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3774 1058 SMART LRR_typ_2 500 524 IPR003591 -
Tpr6g3774 1058 SMART LRR_typ_2 332 356 IPR003591 -
Tpr6g3774 1058 SMART LRR_typ_2 572 596 IPR003591 -
Tpr6g3774 1058 SMART LRR_typ_2 138 162 IPR003591 -
Tpr6g3774 1058 SMART LRR_typ_2 618 642 IPR003591 -
Tpr6g3774 1058 SMART LRR_typ_2 211 234 IPR003591 -
Tpr6g3774 1058 SMART LRR_typ_2 284 308 IPR003591 -
Tpr6g3774 1058 ProSitePatterns Tyrosine protein kinases specific active-site signature. 892 904 IPR008266 GO:0004672|GO:0006468
Tpr6g3774 1058 Gene3D Phosphorylase Kinase; domain 1 725 846 - -
Tpr6g3774 1058 Gene3D Ribonuclease Inhibitor 382 696 IPR032675 -
Tpr6g3774 1058 SUPERFAMILY Protein kinase-like (PK-like) 751 1038 IPR011009 -
Tpr6g3774 1058 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Tpr6g3774 1058 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 151 238 - -
Tpr6g3774 1058 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 239 1057 - -
Tpr6g3774 1058 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 168 - -
Tpr6g3774 1058 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 168 - -
Tpr6g3774 1058 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 151 238 - -
Tpr6g3774 1058 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 239 1057 - -
Tpr6g3774 1058 Gene3D Transferase(Phosphotransferase) domain 1 847 1050 - -
Tpr6g3774 1058 Pfam Leucine Rich Repeat 597 618 IPR001611 GO:0005515
Tpr6g3774 1058 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3774 Tpr-Chr6 42256843 42260485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3774 8 940 Receptor kinase-like Gene Family AT4G08850 43.249 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr6g3774 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3774 - - mtr:MTR_7g081410 1324.69