Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3734 ATGAAAGTTGATGCAGATATGGTGAGTGCTGAATCTCAATTGTTGATGGCAAAAGCATGCGAGGTTTTAATTCAAGAGCTCACATATCGTGCTTGGTTTAATACTAAAGAGAGAAATAGGATTACTATGAAGCCTATTGATATTGCCAAGGTCATTATGGAAACTAATCCCTTTGATGATTTTTTCATGGGTGTTGTTACTCAATATTGTGCCTCTGATGTCAAGCCGCAGGTAGAGAATATGGAAAATCTTACCGTTGCAAACCAACAGGAAAATAAGACTGTGCAGCCTACTGATATCCCCAAGGCCATTATTGAAAATGGCAATGAACTAGACTATGAAAATGTAGAAAAGTTTCTCTATGGAGACCAAGCTTTCTTTCCTCCTGGTGCAGATTTTATGGAAAAAGATCAAATGGAAACAGACCAAGGGTTTGTACAACCCTTCATGATGCAACCACCATTTATGCCTTTAGATCAATTTCCATTCAATTATCAGCCAAAGTGA 507 0.3787 MKVDADMVSAESQLLMAKACEVLIQELTYRAWFNTKERNRITMKPIDIAKVIMETNPFDDFFMGVVTQYCASDVKPQVENMENLTVANQQENKTVQPTDIPKAIIENGNELDYENVEKFLYGDQAFFPPGADFMEKDQMETDQGFVQPFMMQPPFMPLDQFPFNYQPK* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3734 168 Pfam Core histone H2A/H2B/H3/H4 7 51 IPR007125 GO:0003677
Tpr6g3734 168 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 120 - -
Tpr6g3734 168 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 1 120 IPR027170 GO:0003700|GO:0006355|GO:0016602
Tpr6g3734 168 SUPERFAMILY Histone-fold 4 67 IPR009072 GO:0046982
Tpr6g3734 168 Gene3D Histone, subunit A 1 68 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3734 1 66 CCAAT-HAP5 Transcription Factor Family AT1G56170 47.059 1.39e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3734 - K08066 sstn:125858671 64.6994