Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3719 ATGTATCAAATTGCAATCGGGATTGCTCGAGGACTAGAATACTTGCATCGAGGATGTGTTTCAAGAATTTTGCATCTTGATATCAAACCCCAAAATATTCTTTTGGATGAAAACTTTTGCCCAAAAATCTTTGATTTTGGATTAGCTAAAATATATCAAAGGAATGATAGTGTTGTGTCTATACTTGGCACAAGAGGAACTATAGGATACATAGCACCGGAAGTATTTAGCCGAACATATGGTGGGGTTTTTCACAAGTCTGGGGTATACAGTTATGATATGTCAATTCTAGAAATGATTGGAGGAAGAAAGAATTATGACATTGGAGGTTCGTGTACTTCTAAAATGTCCTTTCTAGATTGGATTTATAAGGATCTTGAACAAGGTAATAACCTTGAAAATTGTTTAGCAAACTCAGAAGAAGAAAATGACATGGTGAGACAAATTACTATGCTAATTAGAGATCAAGTAGTGAAGATGATGAAGATGAAAGTTGTGTGTGCAATGTTGCTAATGGTAGTCCTCATGGTTGAAGTGGCTACCATTGCTGAGGCTGTGAACTGTAACCCACTAGAATTGAGCCCATGTCTAGGGGCAATTACGTCAGATTCTCCACCTTCTGCTGAATGTTGCAACAAATTGAAGGAGCAAATACCATGCTTATGTGAATATATCAAAAATCCAATGTTGAGCCCATATGTTAATTCTCCTGGCTCTAAAAGGGTTGCTAGTGCTTGTGGTGTTGACACCCCACAATGTTAA 762 0.374 MYQIAIGIARGLEYLHRGCVSRILHLDIKPQNILLDENFCPKIFDFGLAKIYQRNDSVVSILGTRGTIGYIAPEVFSRTYGGVFHKSGVYSYDMSILEMIGGRKNYDIGGSCTSKMSFLDWIYKDLEQGNNLENCLANSEEENDMVRQITMLIRDQVVKMMKMKVVCAMLLMVVLMVEVATIAEAVNCNPLELSPCLGAITSDSPPSAECCNKLKEQIPCLCEYIKNPMLSPYVNSPGSKRVASACGVDTPQC* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3719 253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 23 35 IPR008271 GO:0004672|GO:0006468
Tpr6g3719 253 SMART aai_6 188 253 IPR016140 -
Tpr6g3719 253 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 152 IPR045874 GO:0004672
Tpr6g3719 253 Gene3D Transferase(Phosphotransferase) domain 1 1 181 - -
Tpr6g3719 253 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3719 253 CDD nsLTP2 188 253 IPR033872 GO:0006869
Tpr6g3719 253 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 187 253 IPR036312 -
Tpr6g3719 253 Gene3D - 186 253 IPR036312 -
Tpr6g3719 253 Pfam Protein kinase domain 3 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3719 253 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 152 - -
Tpr6g3719 253 SUPERFAMILY Protein kinase-like (PK-like) 2 124 IPR011009 -
Tpr6g3719 253 Pfam Probable lipid transfer 178 251 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3719 Tpr-Chr6 41220734 41224222 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3719 1 152 Receptor kinase-like Gene Family AT4G18250 55.414 6.79e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr6g3719 Pkinase 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3719 - - mtr:MTR_1g115485 249.98