Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3715 ATGAAACCTCTACTTCTTCATCATCCATCTTCTTCTACTGTTCTTTCCTTTTTCTCCTTCACACTTTTGTTGATCTCAATCATCAATATTCCAACGTGTATGTGCGACGATGGTGACCAATACAATAACTGCAAAGATGCTTTTACATGCAAAGGAAGCAGTATCTCAAACAGCCTCATGTATCCCTTCTGGGGAGAAAACAGAGAAGAGTATTGTGGTGTTTCTGCTGATTCTAACACAGAGCTCACATGCGAAGAAAGTGTTCCAAAGATAACAATCAATAGCGTCAAATACCGTATTCTTAATTGGGTCAATACAACACAAAAACTCACAGTTGCTAGGGATGATTACTGGGGTGGTATTTGTGCTGTGAGTGTGAGTGACAAGAATAAGATCAGTAGCACATTCGATGATACGGTGTTTCAACGTGATGGTGATGTTCCTTCTCAATTAAGTTTGTTATACAATTGCGATACAAATCAACCCAGTGGTATGTATAGTATTAACTGCAATAATACTAAAGTCGTGTACACCCTTTCCGGTCCTGCTTCGGTCGAATGTAATCCAACTGTTATTGTTGAGTTTCCAATTATGGTAAACCAAGCTGTAGGAATTGCAACTGCGAATGCTATAAACCAAACATTACGAGGCGGTTTCGATTTGACATGGACTGGAAATTATGGAGAGTGTCTAGGGTGTGTTGCTACTGGTGGAGCGTGTGGCAACGATGGAGGAACTGGATTTAGATGTTTCTGCAGAGATGGAGCTTATATAACTGATTGTCATTCAAAAAAGGCACCATCCTCAAGTATCTCTTCATTTGATTGTGCAAATCTAAAAAACTTGAGTTACCCTTTTTGGGGATCAAGTAGACCTCAATATTGTGGCCACCCTTCTTTTGAGCTACAATGCAAAGATGAATTTGCAAGCATTACCATTATGTCACAAAGTTATAGAATTCTTGAAGTCATTGATTCTGATCACAGACTCAAAGTTGTGAGAACTGATTATTGGAACAATATTTGTCCCACCGATCTTATGAACACTACTGTAGGTTCCACTTTCTTCAATTACGGTTCGGATACTCGGAACTTGACAATCTACTATGATTGTCCTTATTCACCATTTCCTATACCAGATAGCTTTTCTCCTCGGTTTAATTGTAGTATAAATGGAACTCAAATGGTTAACTATTTTATGTTGGAGAGTGTTCTTGAGAATGGTGAGGGTTCAGTTTCGTTAAGTAAAACATTGGGAACATGCAAATCTAGAGTGATGGTTCCAATTTTGGACTCAGAAGCCGAAAGGGTAGTGACAAATTCAAGTGTAGAAAATTTGAAGGATGTTATTGATAATGGTTTTGAAGTGGAGTGGAATGCAAATAATAGTTTGTGTCATGAGTGTCAAAGCTCTGGTGGACACTGTGGTTATGATCTAAGCTCAAAGGATTTCACTTGCTTTTGTAAGGATGGATCCTTTCCACATTCATGTAGATCAGGTGAACAAACTATGTTGTCTTTGTCCCTCTCTTCTCCCACCATCATCATCATCATCATCATCTTCTCAATCTTCATCTTCTCTCTCCATCATACAACGTCCTTACCTTCTCATGCATCACTCTCTATCTGCAACAACACCACCTTCAACTGTGGCACCATCACCAACCTTTCCTACCCTTTCACCGGCGGTGACCGTCCTTCCTTCTGTGGGCCACCACAGTTTCATCTAAACTGCCAAAACAACGTTCCAGAGTTGAATATTTCCTCAGTAAGTTACCGAGTTCTTCAAATAAACTCAGCAACTCATTCTCTCACCTTAGCAAGATCAGACCTTTGGAACCAAACATGTACCCATCAATATATTAATTCATCTTTTGATGGAACTAGCTTTAGCTACGGTTTGGGAAACAGTGACCTTACTCTGTTTTATGGGTGCAAACCCACTTCGGTATTCACCGAAAAGCCGCATAATTTGTTTTACTGCAATAGTAATGGAGATAAGAACAATTCATATTCTTTGATTGGCCCATTTCCTTTAGACCCAATTCTTAGTGTTGTTGAATGTGATGAAGGTGTTCGTGTGCCAATTCTTGAAGTGCAAGCTAATAGATTAGTACGAAATCGTTCTTTGCTTATAGAGGTTTTGATGAAAGGGTTTAATGTTAATTATAGCTATCCTTTTGATGATGATTGTAATGAATGTATTGGTTCTGGTGGTCAACAATGTGGGTTTGATTATGATGACAATGAACCTATTTGTATTTGTGGTAATGGGTTGTGTCCATCTTCAGGTAAAAATTCTAACACAGGCATTATAATAGGCGCAGTTGCAGGAGTTGCAGCTCTTGTTTGTATTCTTGGTGCATGCTTTCTGGTTCGGCGAAGGAAGAAAAAAGCTGAGAAATCAAGAAGCATTGACGTCTTCATGCCTCCTTCAAGCAGTGGCACTGGCACTCTAACATCTACTACTAATTCCTCTCAGAGTATTCCTTCTTATCCATCTTCCAAATCTGGAAGAGTGCCGCAGAAGAGTTTCTACTTTGGTGTTCAGGTATTTACCTATGAAGAACTAGAAGAAGCTACCGACAATTTCCACACTACTAAAGAAATTGGAGAGGGAGGTTTTGGAACTGTTTACAAAGGCGAACTCAAAGACGGACGTGTGGTTGCGGTGAAACGCCATTACGAAAGCAACTTTAAACGTGTGGAGCAATTCATGAATGAAGTTGAGATTCTAGCACACTTAAGGCATAAGAACTTGGTGACACTCTTTGGATGTACCTCTAGATCTAGCAGAGAGCTTCTCCTTGTTTATGAATACATACCGAACGGAACAGTGGCTGATCATCTTCACGGGAAACGGTCGAGCTCGGCTATGATTACTTGGCCTGTAAGATTGAACATTGCAGTAGAAACAGCTGAGGCATTAGCCTACCTCCACAAAAAAGATGTCATACACCGCGATGTTAAATCCAACAACATTCTCCTAGACGAAAAGTTTCATGTTAAGGTTGCTGATTTTGGTCTCTCAAGGCTGTTTCCGACCGACGTCACACATGTATCAACTGCTCCACAAGGAACACCTGGTTATGTTGATCCCGAGTATTATCAGTGTTACCAACTCACTGACAAGAGCGATGTTTATAGCTTTGGCGTACTCTTAGTCGAGCTTATATCATCATTACAAGCTGTGGATATTACCAGGCATCGCAACGACGTGAACTTAGCAAACATGGCTGTCAATAAAATTCAAAGCCAAGAACTGAATGAGTTGGTTGATCCTGAACTTGGATATGAAAAAGACGATTCTGTGAGAAGAATGACAACGGCTGTGGCTGAATTAGCATTTAGGTGTTTGCAGCAACAAAAAGACATGAGACCTTCAATGGATGAGGTGTTGGAGATTTTGAAAGCAATCAAGAGTGATGAACTTGAAACACATGATTCAAAAGTATTAGATGTTGTTGTTAGAACAGATGAACTTGTACTTCTGAAGAAGGGTCCTTATCCAACTTCACCAGATTCTGTTGCTGACAAATGGGTTAGCGGCTCTTCTACATCTACTACTACCTCATACTCATAG 3582 0.4001 MKPLLLHHPSSSTVLSFFSFTLLLISIINIPTCMCDDGDQYNNCKDAFTCKGSSISNSLMYPFWGENREEYCGVSADSNTELTCEESVPKITINSVKYRILNWVNTTQKLTVARDDYWGGICAVSVSDKNKISSTFDDTVFQRDGDVPSQLSLLYNCDTNQPSGMYSINCNNTKVVYTLSGPASVECNPTVIVEFPIMVNQAVGIATANAINQTLRGGFDLTWTGNYGECLGCVATGGACGNDGGTGFRCFCRDGAYITDCHSKKAPSSSISSFDCANLKNLSYPFWGSSRPQYCGHPSFELQCKDEFASITIMSQSYRILEVIDSDHRLKVVRTDYWNNICPTDLMNTTVGSTFFNYGSDTRNLTIYYDCPYSPFPIPDSFSPRFNCSINGTQMVNYFMLESVLENGEGSVSLSKTLGTCKSRVMVPILDSEAERVVTNSSVENLKDVIDNGFEVEWNANNSLCHECQSSGGHCGYDLSSKDFTCFCKDGSFPHSCRSGEQTMLSLSLSSPTIIIIIIIFSIFIFSLHHTTSLPSHASLSICNNTTFNCGTITNLSYPFTGGDRPSFCGPPQFHLNCQNNVPELNISSVSYRVLQINSATHSLTLARSDLWNQTCTHQYINSSFDGTSFSYGLGNSDLTLFYGCKPTSVFTEKPHNLFYCNSNGDKNNSYSLIGPFPLDPILSVVECDEGVRVPILEVQANRLVRNRSLLIEVLMKGFNVNYSYPFDDDCNECIGSGGQQCGFDYDDNEPICICGNGLCPSSGKNSNTGIIIGAVAGVAALVCILGACFLVRRRKKKAEKSRSIDVFMPPSSSGTGTLTSTTNSSQSIPSYPSSKSGRVPQKSFYFGVQVFTYEELEEATDNFHTTKEIGEGGFGTVYKGELKDGRVVAVKRHYESNFKRVEQFMNEVEILAHLRHKNLVTLFGCTSRSSRELLLVYEYIPNGTVADHLHGKRSSSAMITWPVRLNIAVETAEALAYLHKKDVIHRDVKSNNILLDEKFHVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVLLVELISSLQAVDITRHRNDVNLANMAVNKIQSQELNELVDPELGYEKDDSVRRMTTAVAELAFRCLQQQKDMRPSMDEVLEILKAIKSDELETHDSKVLDVVVRTDELVLLKKGPYPTSPDSVADKWVSGSSTSTTTSYS* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3715 1193 SUPERFAMILY Protein kinase-like (PK-like) 844 1142 IPR011009 -
Tpr6g3715 1193 ProSiteProfiles Protein kinase domain profile. 864 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3715 1193 Gene3D Transferase(Phosphotransferase) domain 1 941 1153 - -
Tpr6g3715 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 984 996 IPR008271 GO:0004672|GO:0006468
Tpr6g3715 1193 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 504 1189 - -
Tpr6g3715 1193 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 18 270 - -
Tpr6g3715 1193 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 268 494 - -
Tpr6g3715 1193 CDD STKc_IRAK 870 1139 - -
Tpr6g3715 1193 MobiDBLite consensus disorder prediction 816 835 - -
Tpr6g3715 1193 SMART serkin_6 864 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3715 1193 Pfam Protein kinase domain 864 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3715 1193 ProSitePatterns Protein kinases ATP-binding region signature. 870 892 IPR017441 GO:0005524
Tpr6g3715 1193 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 270 IPR044652 -
Tpr6g3715 1193 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 504 1189 IPR044652 -
Tpr6g3715 1193 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 268 494 IPR044652 -
Tpr6g3715 1193 MobiDBLite consensus disorder prediction 1174 1193 - -
Tpr6g3715 1193 Pfam Wall-associated receptor kinase C-terminal 681 757 IPR032872 -
Tpr6g3715 1193 Pfam Wall-associated receptor kinase C-terminal 388 491 IPR032872 -
Tpr6g3715 1193 Pfam Wall-associated receptor kinase C-terminal 184 255 IPR032872 -
Tpr6g3715 1193 Pfam Wall-associated receptor kinase galacturonan-binding 275 333 IPR025287 GO:0030247
Tpr6g3715 1193 Pfam Wall-associated receptor kinase galacturonan-binding 543 607 IPR025287 GO:0030247
Tpr6g3715 1193 MobiDBLite consensus disorder prediction 1177 1193 - -
Tpr6g3715 1193 Gene3D Phosphorylase Kinase; domain 1 839 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3715 Tpr-Chr6 41143458 41152021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3715 548 1192 Receptor kinase-like Gene Family AT1G25390 42.986 4.89e-148 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr6g3715 Pkinase 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3715 - - cam:101490779 1748.79