Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3712 ATGACATATTCATTCCGAGACAAATTAGGTCAAGGGGGATACAGTGTTGTTTACAAAGCAAGTTTACCTGATGGTCGTCAAGTGGCAGTGAAAGTGATAAACGAGTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTAGCTAGTATTAGTAGGACGTCACATGTGAACATTGTTTCACTTTTGGGGTTTTGTTATGAGAACAAAAGGGCACTAATATATGAATTCATGTCCAAAGGATCATTGGATAAGTTTATCCTTAATAGAGGATTTTCTGATGCAACAATTTGTAGCTTGGATTGGAACACAATGTACCAAATTGCAATCGGCATTGCTCGAGGACTAGAATACTTGCATCAAGGATGTGTTTCAAGAATTTTGCATCTTGATATCAAACCCCAAAATATTCTTTTGGATGAAAACTTTTGCCCAAAAATCTCGGATTTTGGATTAGCTAAAATATGCCAAAGGAATGATAGCGTTGTGTCTATACTTGGCACAAGAGGAACTATAGGATACATAGCACCAGAAGTATTTAGCCGAACATATGGTGGAGTTTCTCACAAGTCTGATGTATACAGTTATGGTATGTTAATTCTAGAAATGATTGGAGGAAGAAAGAATTATGACACTGGTGATTCGTGTACTTCTGAAATGTACTTTCCAGACTGGATTTATAAGGATCTTGAACAAGGTAATAACCTTGAGAATTGTTTAGCAAATTCAGATGAAGAAAATGACACGGTGAGACAGATTACTATGGTGAGTCTATGGTGCATTCAAACAAATCCATATAATAGACCATCAATGAGTAAAGTATTAGAAATGCTACAAGGACCACTTCAATCAGTGTCATATCCTCCAAAGCCTTTCCTACATTCTCCTGAAGGGCCATCATTTCAAACTTCATATGTGTCTTCAAGCACTTTGTAA 933 0.3644 MTYSFRDKLGQGGYSVVYKASLPDGRQVAVKVINESKGNGEEFINEVASISRTSHVNIVSLLGFCYENKRALIYEFMSKGSLDKFILNRGFSDATICSLDWNTMYQIAIGIARGLEYLHQGCVSRILHLDIKPQNILLDENFCPKISDFGLAKICQRNDSVVSILGTRGTIGYIAPEVFSRTYGGVSHKSDVYSYGMLILEMIGGRKNYDTGDSCTSEMYFPDWIYKDLEQGNNLENCLANSDEENDTVRQITMVSLWCIQTNPYNRPSMSKVLEMLQGPLQSVSYPPKPFLHSPEGPSFQTSYVSSSTL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3712 310 ProSiteProfiles Protein kinase domain profile. 3 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3712 310 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 309 IPR045874 GO:0004672
Tpr6g3712 310 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Tpr6g3712 310 Pfam Protein kinase domain 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3712 310 Gene3D Transferase(Phosphotransferase) domain 1 78 286 - -
Tpr6g3712 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Tpr6g3712 310 SUPERFAMILY Protein kinase-like (PK-like) 3 277 IPR011009 -
Tpr6g3712 310 Gene3D Phosphorylase Kinase; domain 1 9 77 - -
Tpr6g3712 310 PIRSF ILK 2 285 - -
Tpr6g3712 310 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 309 - -
Tpr6g3712 310 SMART serkin_6 3 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3712 Tpr-Chr6 41072363 41073564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3712 1 309 Receptor kinase-like Gene Family AT4G18250 57.547 5.00e-125 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr6g3712 Pkinase 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3712 - - cam:101489592 523.472