Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3710 ATGAAACCCCTGTTTCATCATTCTTCTTCCATTAATCTTTTCTTGTATGCTATTGTAATTTTGATGATCTCAATCATCAATATTCCAACGTGTATGTGCGACGATGGTGACCAATACAATAACTGCAAAGATGCTTTTACCTGCAAAGGAAGCAGTATCTCAAACAGCCTCATGTATCCCTTCTGGGGAGAAAACAGAGCAGAGTATTGTGGTGTTTCTGCTGATTCTAACACAGAGCTCACATGCGAAGAAAGTGTTCCAAAGATAACAATCAATAGCGTCAAATACCGTATTCTTAAATGGGTCAATACAACACAAAAACTCACAGTTGCTAGGGATGATTACTGGGGTGGTATTTGTGCTGTGAGTGTGAGTGACAAGAATAAGATCAGTAGCACATTCGATGATAACACGGTGTTTCAACGTGATGGTGATGTTCCTTCTCAATTAAGTTTGTTATACAATTGCGATACAAATCAACCGAGTGGTATGTATAGTATTAACTGCAATAATATTAAAGTCGTGTACACCCTTTCCGGTCCTGCTTCGGTCGAATGTAATCCAACTGTTATTGTTGAGTTTCCAATTATGGTAAACCAAGCTGTAGGAATTGCAACTGCGAATGCTATAAACCAAACATTAAAAGGCGGCTTCGATTTGACATGGACTGGAAATTATGGAGAGTGTCTAGGGTGTGTTGCTACTGGTGGAGCGTGTGGCAACGATGGAGGAACTGGATTCAGATGTTTCTGCAGAGATGGAGCTTATATAACTGATTGTCTTTCAAAAAAGGCACCATCCTCAAGTAACAGCTCTAAAACTGGCATTATAATAGGCGCAGTTGTAGGAGTTGGAGCTCTTGTTTTTATTCTTGGTGCATGCTTTCTAGTTCGGCGAAGGAAGAAAAATGCTGAAAAAATGAGTATTTTCAAACAACAACAATCAAGCCTTATCCCACTAAATATTTTCAGAGAAAGAAGAAAACTTGTTGACCACAATGTGGAGGTTTTCATGAGAAGTTATAATTTATCCATGCCAAGAAGATATAGTTATAAGGAAGTAAAAAGGATCACAAACTCATTCCGAAATAAATTAGGCCAAGGAGGATACGGTGTTGTGTACAAAGCAATTTTATCTGATGGTCGTCAAGTGGCGGTGAAACTAATAAATGAGTCAAAGGGAAATGGAGAAGAATTTATAAATGAAGTTGCTAGCATTAGTAAAACATCACACATGAACGTTGTGTCACTTTTAGGCTTTAGTTATGAGGTGAACAAAAGAGCCCTAATATATGAATTCATGCCCAAAGGATCATTGGATAAGTTCATCTACAAAAGAGAGTTTCCTAATGCCATTTGTGATTTTGATTGGAACACTTTGTTCCAAATTGCAATTGGCATTGCTAGAGGTCTAGAGTACTTGCATCATGGATGTAGTTCAAGGATTCTACATCTTGATATAAAGCCTCAAAACATTCTTTTGGATGAAGATTTTTGCCCAAAAATCTCTGATTTTGGACTAGCTAAAATATGCCAAAGGAAGGATAGTATTGTGTCAATACTAGGGACAAGAGGTACTGCAGGATATATGGCGCCAGAAGTATTAAGTAGAGCATTTGGTGGAGTTTCTTATAAATCTGATGTATATAGTTATGGCATGTTGATTCTTGAAATGATTGGAGGAAGAAAGAACTATGACACTGGAGGTACATCTACTTCTGAAATGTACTTTCCAGACTGGATTTATAAGGATCTAGAGCAAGGAAATACTCTTTTAAATTGTTCGATAATCTCCGAGGAAGAAAATGATATGGTTAGAAAGATTACTTTGGTCAGTCTATGGTGCATTCAAACGAAACCATCAGATAGACCACCGATGAATAAAGTAATAGATATGCTACTAGGACCACTTTCATCGGTGTCATATACTCCAAAGCCCGTCTTATGTTCTCCTGAAAGGCCACCACTAGAAGTGTCAGATATGTCTTCGTCCGATTTGTATGAGACAAATTCAATTATGGTATCAAAATAA 2031 0.3757 MKPLFHHSSSINLFLYAIVILMISIINIPTCMCDDGDQYNNCKDAFTCKGSSISNSLMYPFWGENRAEYCGVSADSNTELTCEESVPKITINSVKYRILKWVNTTQKLTVARDDYWGGICAVSVSDKNKISSTFDDNTVFQRDGDVPSQLSLLYNCDTNQPSGMYSINCNNIKVVYTLSGPASVECNPTVIVEFPIMVNQAVGIATANAINQTLKGGFDLTWTGNYGECLGCVATGGACGNDGGTGFRCFCRDGAYITDCLSKKAPSSSNSSKTGIIIGAVVGVGALVFILGACFLVRRRKKNAEKMSIFKQQQSSLIPLNIFRERRKLVDHNVEVFMRSYNLSMPRRYSYKEVKRITNSFRNKLGQGGYGVVYKAILSDGRQVAVKLINESKGNGEEFINEVASISKTSHMNVVSLLGFSYEVNKRALIYEFMPKGSLDKFIYKREFPNAICDFDWNTLFQIAIGIARGLEYLHHGCSSRILHLDIKPQNILLDEDFCPKISDFGLAKICQRKDSIVSILGTRGTAGYMAPEVLSRAFGGVSYKSDVYSYGMLILEMIGGRKNYDTGGTSTSEMYFPDWIYKDLEQGNTLLNCSIISEEENDMVRKITLVSLWCIQTKPSDRPPMNKVIDMLLGPLSSVSYTPKPVLCSPERPPLEVSDMSSSDLYETNSIMVSK* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3710 676 SMART serkin_6 359 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3710 676 ProSiteProfiles Protein kinase domain profile. 359 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3710 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Tpr6g3710 676 Pfam Wall-associated receptor kinase C-terminal 184 254 IPR032872 -
Tpr6g3710 676 Gene3D Phosphorylase Kinase; domain 1 332 433 - -
Tpr6g3710 676 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Tpr6g3710 676 Gene3D Transferase(Phosphotransferase) domain 1 434 641 - -
Tpr6g3710 676 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 673 IPR045874 GO:0004672
Tpr6g3710 676 SUPERFAMILY Protein kinase-like (PK-like) 335 633 IPR011009 -
Tpr6g3710 676 Pfam Protein kinase domain 363 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3710 676 PANTHER TYROSINE KINASE FAMILY PROTEIN 23 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3710 Tpr-Chr6 41042092 41048349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3710 11 672 Receptor kinase-like Gene Family AT5G38260 38.719 7.12e-140 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr6g3710 Pkinase 9.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3710 - - cam:101489912 842.417