LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g3708	ATGGAGTATTATTCCTTCCTCTATACTGCATATAGTACCTTACTCTCTGCTAAGCTAATTACAGTGAGCATGAATACACTAACATATGAATCTGTTTTATACTTTTCAATCCTCTTGTTCATGATTGCCACCGTAGATAGTATTAATCCAGAAAACTATGAAGCAAATTACATGTCCGACCTTTTGAAAGCACTGAACCCAACTCCTATGGGGTGGTCTAATAAAACTCACTACTGTGAATGGGAAGGCATCTCTTGCGACTCTAGTCGATCTGTTACATCCATCAAGCTCCCATCAAGTTCACTCACTGGAAAACTCCCTACCGACATCTTCTCTCTTAATAATCTCACCCACATCGATCTCCACAACAACTCACTCAATGGTGATTTGCCTGATATTAGAAACCTCTTATTGCTCCAAACTGTGTCCCTTGGTCACAATAACTTCACCTCTGTCCCGTACTATTGCTTTCAAAACCTACAAAATCTGAGAACCTTCAACCTTAGCAATAACTTGAAACTCTACCCATGGGTATTTCCTTTGAGTAATTTAGCTTCCTCCACAACTTTGGACTCCCTCGATCTCGAAGCTACAAATATTATAGGCCCATTAGATCCCGATACATTCCATTCGTTTCCAAATTTGCATACTTTTATTATTTCTCACAACAAATTGGAAGGAAGTCTACCTCAGTCTCTCGGGAAATCTGCAATAAGATATTTACGGCTTAACGACCAAGGGGGATATGGGTTTACAGGTACAATTGACGTTATATCAAGAATGAGTAATTTATCTCAAGCATGGCTTCACAATAACAGCTTCACAGATCGAATTCCCAACATGTCCAATTGTACTAATTTGTCTGATTTGCAGCTTCAGTCAAATGTCTTAACTGGTTTGATCCCACCTTCATTACTCACACTACCTAGCTTAAGAATCATCTCTTTGGGCGCCAATATGCTTCAAGGACCGATACCTGTGTTTCACAAGCGTGTTAAAGCAACTTTGAGACCAAATTACTTTTGTCGAAGCGATGTTGGACCTTGTGATCCCCAAATTATGATTTTGCTTGAAATTTTTGAAGGTTTTAGGTCTCCTAATATTCTTATGCCGCAAATAATAAGTGGAAACAATGCTTGTAGCACAGTGCCCATTGAGTGTCAAAGAGAGAAGATTGTTAGTTTTGAGATCTTGGATTTTAATTTAACGGGAACCATTTCTCCCACATTTTCCAATTTAACAAGTTTAGTGAACTTAACTCTTGCCGGAAATTCTTTGAATGGTTCAATACCACCGAGTCTTACAACTTTGCCGCAACTCCAACTTCTTGATCTTTCTAATAATAATCTATCGGGAGTAATTCCCAAATTTTCATCTAAAGTTAAATTAAATACCATAGGCAATGCTTTGCTTCACCAAAATATGTCTAGACAAGGTGGAGGTGAAAATGCAACTACTGGAGGTGATGTTCAAACTAGAGGTTCATCTAAAGCAAACCTTAGACCTTTTTGGATTGCAGGGGCATCATTGATAAGTGTTGGGTTTGTTATACTTATCGTGATTATTTGTAATCATAAGAGATATCCTATTTTAGTACAGTGGTTGATGTTCTGGAAAACAAAAAAATCTACTGACCATGATGTGGATGATTTCATACAAAGATTTAATTTGTCAGTGCCAATTAAGCAATATAGATATGCAGAAGTGAAAAGAATGACAAATTCATTCAGAGATAAATTAGGTCAAGGAGGATATGGTGTTGTGTACAAAGCAAGCTTACCTGATGGTCGTCAAGTGGCAGTTAAAATTATAAACGAGTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGCATTAGTAGAACGTCACATGTGAACATCGTCACACTTTTGGGTTTTTGTTATGAGAACAAAAGAGCACTAATATATGAATTCATGCCCAAAGGATCATTAGATAACTTCATTTGTAAAAGCGGATTTCCTAATGTTACTTGTAATTTGGATTGGAAAACAATGTACCAAATTGCAATCGGCATTGCTCGAGGTCTAGAATACCTGCATCAAGGATGTATTTCAAGAATTTTGCATCTTGATATTAAACCCCAAAACATTCTTTTGGATGAAGATTTTTGCCCAAAAATCTCTGATTTTGGACTGGCTAAAATATGTCAAAGAAAGGATAGTATTGTTTCAATGTTGGGCACAAGAGGAACTATAGGATTCATAGCACCAGAAGTATTTAGCCGAACATATGGCGGAGTTTCTCACAAGTCTGATGTATACAGTTATGGTATGTTAATCATAGAAATGATCGGAGGAAGAAAGAATTCTCACACTGGAGGGTCATGTACTTCTGAAATGTTATTTCCAGACTGGATTTATAAGGATCTCGAGTTAAGTAATAACTTTGTAAATTGTTTATCAAATTCAGAGGAAGAAAACGATGTGGTGAGAAAGATTACTATGGTTAGTTTATGGTGCATTCAAACAAATCCATCGGACAGACCATCGATGAGTAAAGTATTAGAAATGCTACAAGGGCCACTTCAGTCGGTGCCGTATCCTCCAAAGCCTTTCTTATATTCTTCCGAAATTCCATCATTACAAATTTCATACGAGTCTTCCAAAAATTTGTTAGAGAGAAATTCAATACCTTAA	2664	0.369	MEYYSFLYTAYSTLLSAKLITVSMNTLTYESVLYFSILLFMIATVDSINPENYEANYMSDLLKALNPTPMGWSNKTHYCEWEGISCDSSRSVTSIKLPSSSLTGKLPTDIFSLNNLTHIDLHNNSLNGDLPDIRNLLLLQTVSLGHNNFTSVPYYCFQNLQNLRTFNLSNNLKLYPWVFPLSNLASSTTLDSLDLEATNIIGPLDPDTFHSFPNLHTFIISHNKLEGSLPQSLGKSAIRYLRLNDQGGYGFTGTIDVISRMSNLSQAWLHNNSFTDRIPNMSNCTNLSDLQLQSNVLTGLIPPSLLTLPSLRIISLGANMLQGPIPVFHKRVKATLRPNYFCRSDVGPCDPQIMILLEIFEGFRSPNILMPQIISGNNACSTVPIECQREKIVSFEILDFNLTGTISPTFSNLTSLVNLTLAGNSLNGSIPPSLTTLPQLQLLDLSNNNLSGVIPKFSSKVKLNTIGNALLHQNMSRQGGGENATTGGDVQTRGSSKANLRPFWIAGASLISVGFVILIVIICNHKRYPILVQWLMFWKTKKSTDHDVDDFIQRFNLSVPIKQYRYAEVKRMTNSFRDKLGQGGYGVVYKASLPDGRQVAVKIINESKGNGEEFINEVASISRTSHVNIVTLLGFCYENKRALIYEFMPKGSLDNFICKSGFPNVTCNLDWKTMYQIAIGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQRKDSIVSMLGTRGTIGFIAPEVFSRTYGGVSHKSDVYSYGMLIIEMIGGRKNSHTGGSCTSEMLFPDWIYKDLELSNNFVNCLSNSEEENDVVRKITMVSLWCIQTNPSDRPSMSKVLEMLQGPLQSVPYPPKPFLYSSEIPSLQISYESSKNLLERNSIP*	888

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g3708	887	PANTHER	TYROSINE KINASE FAMILY PROTEIN	42	886	-	-
	Tpr6g3708	887	Gene3D	Ribonuclease Inhibitor	352	475	IPR032675	-
	Tpr6g3708	887	SUPERFAMILY	L domain-like	388	458	-	-
	Tpr6g3708	887	Gene3D	Phosphorylase Kinase; domain 1	538	647	-	-
	Tpr6g3708	887	ProSitePatterns	Protein kinases ATP-binding region signature.	580	602	IPR017441	GO:0005524
	Tpr6g3708	887	ProSiteProfiles	Protein kinase domain profile.	574	862	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr6g3708	887	Gene3D	Transferase(Phosphotransferase) domain 1	648	854	-	-
	Tpr6g3708	887	SUPERFAMILY	L domain-like	73	329	-	-
	Tpr6g3708	887	Pfam	Protein kinase domain	578	845	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr6g3708	887	SMART	LRR_typ_2	136	159	IPR003591	-
	Tpr6g3708	887	SMART	LRR_typ_2	212	236	IPR003591	-
	Tpr6g3708	887	SMART	LRR_typ_2	437	459	IPR003591	-
	Tpr6g3708	887	SMART	serkin_6	574	851	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr6g3708	887	ProSiteProfiles	Leucine-rich repeat profile.	115	137	IPR001611	GO:0005515
	Tpr6g3708	887	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	696	708	IPR008271	GO:0004672\|GO:0006468
	Tpr6g3708	887	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	42	886	IPR045874	GO:0004672
	Tpr6g3708	887	Gene3D	Ribonuclease Inhibitor	56	347	IPR032675	-
	Tpr6g3708	887	SUPERFAMILY	Protein kinase-like (PK-like)	552	847	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g3708	Tpr-Chr6	41003719	41020071	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g3708	491	885	Receptor kinase-like Gene Family	AT4G18250	50.365	2.82e-129	402

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Tpr6g3708		Pkinase	4e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g3708	-		-	cam:101489592	1077.77