Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3707 ATGAAAATATTAAGCCATGGATATGTTTTGTTATCCAACCTCTTACTAATAATTTCCATCGCTAATGTTAGTAATGGAGTAGACTATGAAGCAGATTACATGTTCCAACTTATGAAAGCAATAACCCCAACTCCCACTGGATGGTCTAACAAAACTCACTACTGCAAATGGAAAGGCATCTCTTGTAATTCAACTACTCAAGTTGTTACCTCCATCATGCTCCCATCAAGTTCACTCACTGGGACACTCCCTCCCGACATCTACACTCTCACTAATCTCACCCATATCGATCTTCACAACAACTCACTCAATGGTTCTTTGCCTGATTTTGAAGGCCTCTTGCTCCAAATTGTATCCCTTGGTCACAATAATTTCACCTCTATTCCAGACGATTGCTTTCGATATTTATCTGATCTGAGAACCCTCAACCTCAGCAATAACTTGAATCTCGACCCATGGGTATTTCCTATGGATGATTTATCTTTCTCCACTTCTTTGGAAACCCTCGATCTCAACGCTACAAATATGATTGGTCCACTACTTCCAGAAAAGTTTGATTCGTTTCCAAATTTGCATACTTTTATTATTTCTCACAACAAATTGAAAGGAAGTCTACCCCAGTCTCTCGCGAAATCTGCTGTAAGATATTTACACCTTAACAATAACAGTTTCTCGGGTACAATTGACGTTATATCAAGCATGAGTAAGTTATCTCAATCATGGCTTCACAATAACACCTTCTCGGGTCAAATTCCCAACATGTCCCATTGTATTAATTTGTTTGATTTGCAACTTCAATCAAATTTTTTAACTGGTTTGGTCCCACCTTCATTGCTTGCGCTATCTAGCTTGAACATCATCTCGTTGGACAACAATATACTTCAAGGACCGATACCTGTGTTTCACAAGGGCGTTAAAGCAACTTGGGAATCAAATAACTTTTGTCGAAGTGATGTTGGGCCATGTGATCCCCAAGTTACAATTTTAAATAAAATATCTGAAGCTCTTGGGTCTCCTAGCTTTTTGTCAACCGAAGGGAACAATGTTTGTACCGGAGGGCAATGGACCAGTATATCGACCGACAATGTCTTGATTAAGTGTGAAAGAGGGAAGATTGTTACATTGAAGTTCCGGGATTTTAGATTAACAGGAACCATCTCTCCCGCATTTTGCAAGTTAACAAGTTTGGTGAACTTGACGCTTGCTCGCATTAAATTGACGGGTTCAATACCACCCAGTCTTACAACTTTGCCTCAATTGCAGATTCTTGATGTTTCTAATAATAATCTATCAGGAGTAATTCCCAAATTTTCATCCAAGGTTAAGTTAAACACCACAGGCAATGTTTTGCTTCGGCAAAATATGTCTAGACAAGATGGAGGTGATGTTCAAACTCAAGGTTCATCTAAAGCAAACCTTAGACTTGTAATTTGGATTACAGGGGCATCAATGATTATTGTTGGAACTGTCATTCTTATGGTGTTGATTATTTGTAAACGTAAGAGGTATCATATTTTGGTAAAAAGGTGGGTATTCAAGAAAACAAATAAATTTATTGACCACAATGTGGAGGATTTCATGCAAAGTTATAACTTGTTAGTGCCAATTAAGCAATATCGATATTCAGAAGTCGAAAGAATGACAAACTCATTCCGAGACAAATTAGGTCAAGGAGGATATGGTGTTGTTTACAAAGCAAGTTTACCTGATGGTCGTCAAGTGGCAGTGAAAGTGATAAAAGACTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTAGCTAGTATTAGTAGGACGTCACATGTAAATATTGTTTCACTTTTGGGGTTTTGTTATGAGAACAAAAGAGCACTAATATATGAATTCATGTCCAAAGGGTCATTGGATAAGTTTATCCTTAAAAATGGATTTCCTGATGCAATTTGTAGCTTGGATTGGAACACAATGTACGAAATTGCAATCGGCATTGCTCGAGGACTAGAGTACTTGCATCAAGGATGTGTTACAAGAATTTTGCATCTTGATATCAAACCCCAAAATATTCTTTTGGATGAAAACTTTTTCCCAAAAATCTCTGATTTTGGATTAGCTAAAATATGCCAAAGGAATGATAGTGTTGTGTCTATACTTGGCACAAGAGGAACTATAGGATACATAGCACCAGAAGTATTTAGCCGAACATATGGTGGAGTTTCTCACAAGTCTGACGTATACAGTTATGGTATGTTAATTCTAGAAATGATTGGAGGAAGAAAGAATTATGACACTGGAGGTTCGTGTACTTCTGAATTGTACTTTCCAGATTGGATTTATAAGGATCTTGAACAAGCTGGTAATAATAATGAGAATTGTTTAGCAAACTCAGAAGAAGAAAATGACATGGTGAGACAAATTACTATGGTGAGTCTATGGTGCATTCAAACGAATCCATCAGATAGACCATCAATGAGTAGAGTATTAGAAATGCTACAAGGACCACTTCAGTCAGTGTCATATCCTCCAAAGCCTTTCCTACATTCTCCTGAACAACAATCATTTCAAACTTCATATGTGTCTTCAAGCAATTTTTGA 2571 0.3726 MKILSHGYVLLSNLLLIISIANVSNGVDYEADYMFQLMKAITPTPTGWSNKTHYCKWKGISCNSTTQVVTSIMLPSSSLTGTLPPDIYTLTNLTHIDLHNNSLNGSLPDFEGLLLQIVSLGHNNFTSIPDDCFRYLSDLRTLNLSNNLNLDPWVFPMDDLSFSTSLETLDLNATNMIGPLLPEKFDSFPNLHTFIISHNKLKGSLPQSLAKSAVRYLHLNNNSFSGTIDVISSMSKLSQSWLHNNTFSGQIPNMSHCINLFDLQLQSNFLTGLVPPSLLALSSLNIISLDNNILQGPIPVFHKGVKATWESNNFCRSDVGPCDPQVTILNKISEALGSPSFLSTEGNNVCTGGQWTSISTDNVLIKCERGKIVTLKFRDFRLTGTISPAFCKLTSLVNLTLARIKLTGSIPPSLTTLPQLQILDVSNNNLSGVIPKFSSKVKLNTTGNVLLRQNMSRQDGGDVQTQGSSKANLRLVIWITGASMIIVGTVILMVLIICKRKRYHILVKRWVFKKTNKFIDHNVEDFMQSYNLLVPIKQYRYSEVERMTNSFRDKLGQGGYGVVYKASLPDGRQVAVKVIKDSKGNGEEFINEVASISRTSHVNIVSLLGFCYENKRALIYEFMSKGSLDKFILKNGFPDAICSLDWNTMYEIAIGIARGLEYLHQGCVTRILHLDIKPQNILLDENFFPKISDFGLAKICQRNDSVVSILGTRGTIGYIAPEVFSRTYGGVSHKSDVYSYGMLILEMIGGRKNYDTGGSCTSELYFPDWIYKDLEQAGNNNENCLANSEEENDMVRQITMVSLWCIQTNPSDRPSMSRVLEMLQGPLQSVSYPPKPFLHSPEQQSFQTSYVSSSNF* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3707 856 SMART serkin_6 549 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3707 856 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Tpr6g3707 856 SUPERFAMILY L domain-like 48 444 - -
Tpr6g3707 856 ProSitePatterns Protein kinases ATP-binding region signature. 555 577 IPR017441 GO:0005524
Tpr6g3707 856 Pfam Leucine rich repeat 115 149 IPR001611 GO:0005515
Tpr6g3707 856 Gene3D Phosphorylase Kinase; domain 1 522 622 - -
Tpr6g3707 856 ProSiteProfiles Leucine-rich repeat profile. 92 114 IPR001611 GO:0005515
Tpr6g3707 856 Gene3D Ribonuclease Inhibitor 29 322 IPR032675 -
Tpr6g3707 856 ProSiteProfiles Protein kinase domain profile. 549 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3707 856 Pfam Protein kinase domain 553 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3707 856 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 855 IPR045874 GO:0004672
Tpr6g3707 856 Gene3D Transferase(Phosphotransferase) domain 1 623 832 - -
Tpr6g3707 856 Gene3D Ribonuclease Inhibitor 325 455 IPR032675 -
Tpr6g3707 856 PANTHER TYROSINE KINASE FAMILY PROTEIN 19 855 - -
Tpr6g3707 856 SUPERFAMILY Protein kinase-like (PK-like) 526 823 IPR011009 -
Tpr6g3707 856 SMART LRR_typ_2 90 112 IPR003591 -
Tpr6g3707 856 SMART LRR_typ_2 136 157 IPR003591 -
Tpr6g3707 856 SMART LRR_typ_2 115 135 IPR003591 -
Tpr6g3707 856 SMART LRR_typ_2 417 439 IPR003591 -
Tpr6g3707 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 671 683 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3707 Tpr-Chr6 40950205 40953868 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3707 479 849 Receptor kinase-like Gene Family AT1G66910 51.604 2.18e-127 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr6g3707 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3707 - - cam:101489592 1105.89