Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3705 ATGAAGATATTCATCCATGGATATTTTTTGTTATCCAACCTCTTACTAATAATTTCCATCACTGCTATTATTAATGAAGGTGAATACAATGAAGCAGATTACATGTCCGACCTTTTGAAAGCACTTACCCCAACTCCAACAGGATGGTCTAACAAAACTCACTACTGCAAATGGAAAGGCATCTCTTGCAACTCTATTCAAGCTGTTACCTCTATCATGCTCCCATCAAGTTCACTCACTGGAACACTCCCTATCAGTATCAACACTCTCACTAATCTCACCCACATTGATCTCCACAACAATTCACTCACCGGTTCCTTGCCTTATTTAGATAGGCTTTACAGGGTCCATACAATATCCCTTGGTTACAATAACTTCACCTCCATCCCAGACAGTATTTTTTATGGCATAAAAGATCTCAAAACTCTTAACCTTAGCAATAACTTGAATCTCCCCTCATGGGTATTTCCTATGAAAGATTTATCTTTCTCCACTTCTTTGGAAACCCTCGATCTCAAAGCTACGAATATGATTAGCTCGTTAGATCCGGAAATGTTTAATTCGTTTCCAAATTTGCATACTTTTATTATTTCTCATAACAAAATGGACGGAAGTCTACCCCAGTCTCTCGGAAAATCTGCAGTGAGGTATTTACATCTTAACAACCAGGGAGGATATGGGTTTACGGGTACAATTGACGTTATATCAAGCATGAGTAATTTATCTCAAGCGTGGCTTCACAATAACAGTTTCACGGGTCGAATTCCCAATATTTTCAATTGTACTAATTTGTTTGATTTGCAGCTTCACTCAAATCGCTTAACTGGTTTGATCCCACCTTCCTTACTAGCTCTATCTAGCTTGAACAAAATCTCTTTGGATAACAATATGCTTCAAGGACCAATACCTTTGTTCCGCAAGGGTGTTAATGCAACATGGAAATCAAATTCCTTTTGTCGAAGCGAATTTGGACCTTGTGATTCCCAAGTTATGATTTTGCTTGAAATTTTTGAAGCTTTAGAGTCACCTTATTTTTTGATAATTAAAGGGAACAATGCTTGCACCGGAGGGTCGGCCAACGTCTTGATTTGTTGTGAAAGAGGGAAGATTGTTAGTTTTAAAATCTGGAATTTTATTTTAAGAGGAACCATCTCTCCGGCATTTTCCAATTTAATAAGTTTAGTGAACTTGACTCTTGCTGACAATTCTTTGACGGGATCAATACCATACAGTCTTACAACTTTGCCTCAACTTCAACTTCTTGATGTTTCTAATAATAATCTATCGGGAGCAATTCCGAAATTTTCATCCAAGGTTAAGTTAAATACCACTGGGAATGCTTTGCTTGGCCAAACTGGAGGTTCATCTAAAACAAACCTTAGACTTGTAATTTGGATTGCAGGGACATTGATGTTTACCGCTGGATTTATCATATTTATTGTGTTGATTATTTATAAACGTAAGAGGTATCATATTTTGGTAAAAAGGTTGGTCTTTAAGAAAACAAAAAACTATATTGATCACAATGTGGAGGATTTCATACAGAGTTATAACTTGTCAGTGCCAATTAAGCAATATAGATATTCAGAAGTTAAAAGAATGACAAACTCATTTAGGGACAAATTAGGTCAAGGAGGATACGGTGTTGTTTACAAAGCAAGTTTACTTGATGGACGTCAAGTGGCGGTGAAAGTGATAAACGAGTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCGAGTATTAGTAGAACATCACATGTGAACATCGTTTCACTTTTAGGTTTTTGTTATGAGAACAAAAGAGCACTAATATATGAATTCATGTCCAACGGGTCATTGGATAAGTTTATCCTTAAAAGAGGATTTCCCAATACAATTTGTAGTTTGGATTGGAACACAATGTACCAAATTGCAATCGGCATTGCTCGAGGACTAGAATACTTGCATCAAGGATGTATTTCAAGAATTTTGCATCTTGATATCAAACCCCAAAACATTCTTTTGGATGAAAATTTTTGTCCAAAAATCTCTGATTTTGGACTAGCTAAAATATGTCAAAGGAATGATAGCGTTGTGTCTATACTTGGTACAAGAGGAACTATAGGATACATAGCACCAGAAGTATTCAGTCGAACATATGGTGGTGTTTCTCACAAGTCTGACGTATACAGTTATGGTATGTTAATTCTAGAAATGATTGGTGGAAAAAAGAATTATGACACTAGAGGTTCATGTACTTCTGAAATGTATTTTCCAGACTGGATTTATAAGGATCTTGAACAGGGTAATAATAATCTTGAGAATTGTTTAGCAAGTTCAAATGAAGAAAATGACATGGTGAGAAAGATTACTATGGTGAGTCTATGGTGCATTCAAATCAATCCATTAGATAGACCATCAATGAGTAAAGTAATAGAAATGCTACAAGGACCACTTCAGTCAGTGTCATATCCTCCAAAGTTTTTCTTACATTCTCCTGAAGTGTCATCATTATAA 2502 0.3593 MKIFIHGYFLLSNLLLIISITAIINEGEYNEADYMSDLLKALTPTPTGWSNKTHYCKWKGISCNSIQAVTSIMLPSSSLTGTLPISINTLTNLTHIDLHNNSLTGSLPYLDRLYRVHTISLGYNNFTSIPDSIFYGIKDLKTLNLSNNLNLPSWVFPMKDLSFSTSLETLDLKATNMISSLDPEMFNSFPNLHTFIISHNKMDGSLPQSLGKSAVRYLHLNNQGGYGFTGTIDVISSMSNLSQAWLHNNSFTGRIPNIFNCTNLFDLQLHSNRLTGLIPPSLLALSSLNKISLDNNMLQGPIPLFRKGVNATWKSNSFCRSEFGPCDSQVMILLEIFEALESPYFLIIKGNNACTGGSANVLICCERGKIVSFKIWNFILRGTISPAFSNLISLVNLTLADNSLTGSIPYSLTTLPQLQLLDVSNNNLSGAIPKFSSKVKLNTTGNALLGQTGGSSKTNLRLVIWIAGTLMFTAGFIIFIVLIIYKRKRYHILVKRLVFKKTKNYIDHNVEDFIQSYNLSVPIKQYRYSEVKRMTNSFRDKLGQGGYGVVYKASLLDGRQVAVKVINESKGNGEEFINEVASISRTSHVNIVSLLGFCYENKRALIYEFMSNGSLDKFILKRGFPNTICSLDWNTMYQIAIGIARGLEYLHQGCISRILHLDIKPQNILLDENFCPKISDFGLAKICQRNDSVVSILGTRGTIGYIAPEVFSRTYGGVSHKSDVYSYGMLILEMIGGKKNYDTRGSCTSEMYFPDWIYKDLEQGNNNLENCLASSNEENDMVRKITMVSLWCIQINPLDRPSMSKVIEMLQGPLQSVSYPPKFFLHSPEVSSL* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3705 833 Gene3D Ribonuclease Inhibitor 329 452 IPR032675 -
Tpr6g3705 833 SUPERFAMILY Protein kinase-like (PK-like) 513 810 IPR011009 -
Tpr6g3705 833 Gene3D Ribonuclease Inhibitor 37 326 IPR032675 -
Tpr6g3705 833 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 832 - -
Tpr6g3705 833 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 832 IPR045874 GO:0004672
Tpr6g3705 833 ProSiteProfiles Leucine-rich repeat profile. 92 114 IPR001611 GO:0005515
Tpr6g3705 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Tpr6g3705 833 Coils Coil 758 778 - -
Tpr6g3705 833 Pfam Leucine rich repeat N-terminal domain 34 64 IPR013210 -
Tpr6g3705 833 Pfam Protein kinase domain 540 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3705 833 Gene3D Phosphorylase Kinase; domain 1 510 609 - -
Tpr6g3705 833 SMART serkin_6 536 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3705 833 ProSiteProfiles Protein kinase domain profile. 536 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3705 833 Pfam Leucine rich repeat 116 150 IPR001611 GO:0005515
Tpr6g3705 833 Pfam Leucine rich repeat 166 222 IPR001611 GO:0005515
Tpr6g3705 833 SMART LRR_typ_2 90 112 IPR003591 -
Tpr6g3705 833 SMART LRR_typ_2 113 136 IPR003591 -
Tpr6g3705 833 SMART LRR_typ_2 165 188 IPR003591 -
Tpr6g3705 833 SMART LRR_typ_2 415 437 IPR003591 -
Tpr6g3705 833 SUPERFAMILY L domain-like 52 441 - -
Tpr6g3705 833 Gene3D Transferase(Phosphotransferase) domain 1 610 819 - -
Tpr6g3705 833 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3705 Tpr-Chr6 40911444 40916508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3705 468 833 Receptor kinase-like Gene Family AT1G66910 52.830 1.73e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr6g3705 Pkinase 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3705 - - cam:101489592 1086.63