Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3704 ATGGCCAATGTTGATTTTCTTGAAAATTCCATTACTACCCCTACCTCCAATACTCTAAAGCTCTTTGGCATTACCATTCAAGAAGAAGCTTGTTTGATAAATCAATCTCTACCACTAATATCATCACAATCAGAATCATCTGAGCCTTTGAATGAGAGAAAATTATATGAGTGCCAATATTGTTGTAGAGAATTTGCAAATTCGCAGGCATTAGGAGGACACCAAAACGCGCACAAGAAAGAAAGACAACTTTTGAAACGTGCTCAAATGCAAGCTGCTCGTCGGTTTGTTCCTTCGCATTTTCATAACACATTCAGGTCGCAGCCGCTGCCGCAACATCATTTCCTTGCTGGTGGTGTACCATCTCAGGTACCTTCATCATCGTGGCTATACACGACGCATGCCACAGGTTCAGGAGCTTTTTTAGCTCCGGTAGCTGCGTTTGATGGGAGCACTCATTACCATAGTTCTAAATTTCATGGATTCAACGGTGGTGATTGTAGTGAACAAGGGTTCGGTTTAAATTTGCATCTTGGCCTATGA 543 0.4199 MANVDFLENSITTPTSNTLKLFGITIQEEACLINQSLPLISSQSESSEPLNERKLYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARRFVPSHFHNTFRSQPLPQHHFLAGGVPSQVPSSSWLYTTHATGSGAFLAPVAAFDGSTHYHSSKFHGFNGGDCSEQGFGLNLHLGL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3704 180 Gene3D Classic Zinc Finger 35 107 - -
Tpr6g3704 180 PANTHER ZINC FINGER PROTEIN 5 1 180 IPR044299 GO:0010090
Tpr6g3704 180 PANTHER ZINC FINGER PROTEIN 6-LIKE 1 180 - -
Tpr6g3704 180 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Tpr6g3704 180 SUPERFAMILY beta-beta-alpha zinc fingers 53 83 IPR036236 -
Tpr6g3704 180 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3704 Tpr-Chr6 40857833 40858515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3704 16 180 C2H2 Transcription Factor Family AT1G67030 40.513 8.54e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3704 - - gmx:100500337 144.05