Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3701 ATGAGTGATTCTTCTGTGAAGAATTTGGCTATTACGGATAAGGTTCAAAAACCTGGTGGTTGTGCTGGCATTTTCTTTCAGCTTATTGACTGGAAGAAGAGACTTGTTAAGAAAAAGCTCTTCTCCAAGAAACTTCTCACTCCTGCTCGTGCAAAAAAGTTTAGGGGAGATGAAAAAATGCCAAATTCCAAACATCACTTGATTGCTAATGAAAATAGTGGAGGTTTTCCAAAAGATGGGAGTTATGGTGTAGATGTAGATCAAAAGAGGGAAATGCGAGTTCCGAGTTTGGTAGCTCGGTTGATGGGTCTAGATTCTATTCCAGCTTCGCAACGAGATAAATCGAAGAAAGCTTTGTGTCCTGATTATAGCTGTGGCGATGAGAAAGGGTGTCTGGGTAATGATTGTGAGTTGGATAGGCAAGGAAATGATTTGGAAATGAGAGTTGTAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACCGGAGTGTGTGAGAGAAAGGCGGTGACTAGGTTTGGAGCGGAGGCCCTTCATATTAGAAGTGTTTTGTCGCGAGCTAAAAAGTATAACCACAATAATCATCATCATCATCCAAAACTTGCTTCTCCTTTAAAGAGTCCTAGAATTAGTTCCGGAAAAAGTGCTTCTCGAAGCTCTAGATTAATAGGAGCAGCTGCCAAAATTTTGGAACCCGGATTGCAGGGGAGTAGAGGTAAAGGCACTCTTATGTATCATGCTTCCGCGTGTCCTCTTAAGACCAGCATTGTAATGGATGATGCTGGAAATAAGTCATCGGTTATGCAAAATCAATCCTGTCACGTTTCCAGCACATCCAAACCTTTAATTGGGCAGACTTCTTGCAAAAATTGTGGTAATTTGCTTGATGTAATTGACTGCAAGGCAGAGGTTAGGGGACCACCCGATGTTCCTCCACCGCTCGTTTCAGATGCGATCACTGCTACCTCGATGGCATCATCATATAAGGGAAAGTCATTCACTCCTTCTCATGGACAAGAAAGAGATATTGTACTACTAAGAAGTCAGGAAAAGTTCTCATCTCATGCTGCCGATGAAGAGGGGAAGAATTATTCACAACAGTCGTGGAATGAACCGACTACCATAAGAATGTCAAGGCCCCGCGAAGGTCCGGCTAAATGGAGTTCATCATGCCAGCCATTAAGGACCCGAGAGGATGATGCATCTTCTTTTACCTATAAACACAAAACGCAAGAACCAAATTTAAGTAGTGAAAGCTCTTCATCTGGATCTACAACGTGTAGTATGCAAGTAAAAAGAGTTTCATCGTGTGCGAGCAGTGCAAGAGGGACTAAAGACTTTGTTGCTTTGAATAGAAGCGCAAGTGGTAAAACGAGGATGAGGTCACCTACTAAAGTTGATAGTTCCAAATTTGATTTAGAGAAAAAACCTTGTAATAGACAGCATGAGTCCTTGTCTCATGTAAGGTCATTAGAGAGGAAAAGGACACCAAATGTCACACCACTCAAAGGCACAACTCCAGCTAATTCAGTTGGTTTGAAACAGAGAAATCTTCGTCATGATGCAATTAGTGGGAAAAGGAGGGACTTTGACTCTTCCTCATTGATAGTGTCCAATGTAAAAAATAGAGATGGTCGAGGAGAACCGGTTAAGGTGAGCCACAATAGGAACAATGATGCAGTTTCATTCACATTTAGTGCCCCTTTAAAGCAAAAGATGGGAATGCTTACGGAGGAGGAAAAGATAAATTACAACAATGAGAGGAATAAGTACTTCGAAAGACCTTCACCCTTGAAAGTTGATGGTTTAGGTGCCTTTCTAGAAGAAAAGTTGAAGGAATTAACTTCTCAACAAAACGACGTACCTCAAAAATCAAGTGCCGTGATTCTTCAAGAGCTGATATCTGCTCTAAGTTCAGAACATTTGATCTGTCACGACGGTCATATGCATAATGAAGATGCTGGTTTCCTTTGTGGAGCGAAGCAAGAAAACTTGTTAGGAACCTCTTGCAGTGGTAATCATCTCAGCCCTGGATCTGTTCTGGAAGCTTCGTTTTCTTCTAGTAGTCTTGACGAGAGCTCAGGGCGTGGTTTTCACCCCGATTCAATGAATTTCTCATATAGTCAGCCAGAACAATCGGAGCATGATGATGAACTTCTAGATTCTGCAGCATCCTTCAATAAAGGAAGTATAAGCAAGATACTAGCTGTTATTATCAACCAAATTCCTATGGCATTGCAATGTTTATATTCTTTCGGGACACAATTCACTAGAAGCAATTTCAACAATATGAAGGATGTTCTCTTGAATGCTGAACTAGTGCTTCAAATTTCAAATGAACGCAGTGAGGAAGAAATACCGCAGCTTCTAATTCATCGGTTTCTTCTTAACGAATTGGACACTATGACAGATGATGCTATGTGGACTGATTTTAATAGTTTTGTCGGTTACGATGATTCCAAATCAAGAACGATGCTTAAAGGATTTGTCTCTGATTGTGTTGTGGAATATCTAGAATCAAATTGTTGCCAATATTTTACCTCTGGTTTCAACGCATGGACAAAGCTGCCATTATGCATAAAAGCCGAGAATTTGGTTGAAGAGGTCAAGAGAGAGGTGAAGAAGTGTGCATGTATGACCGAGATGGTACCTGATGAAATAATCGAATGGGAGATGAGTCATTCCCTCGGAAAATGGGATGATTTTGATATTGAAGCATTTGAGGCTGGTGTTGATATTGATGGATACATTCTTCATAATTTGGTTGATGAAGTTGTTGTAGACCTTGTAGGTTGCAAGCATAGTTCTTATTCCTTTTGA 2820 0.4071 MSDSSVKNLAITDKVQKPGGCAGIFFQLIDWKKRLVKKKLFSKKLLTPARAKKFRGDEKMPNSKHHLIANENSGGFPKDGSYGVDVDQKREMRVPSLVARLMGLDSIPASQRDKSKKALCPDYSCGDEKGCLGNDCELDRQGNDLEMRVVKHDSRPQKLQKTGVCERKAVTRFGAEALHIRSVLSRAKKYNHNNHHHHPKLASPLKSPRISSGKSASRSSRLIGAAAKILEPGLQGSRGKGTLMYHASACPLKTSIVMDDAGNKSSVMQNQSCHVSSTSKPLIGQTSCKNCGNLLDVIDCKAEVRGPPDVPPPLVSDAITATSMASSYKGKSFTPSHGQERDIVLLRSQEKFSSHAADEEGKNYSQQSWNEPTTIRMSRPREGPAKWSSSCQPLRTREDDASSFTYKHKTQEPNLSSESSSSGSTTCSMQVKRVSSCASSARGTKDFVALNRSASGKTRMRSPTKVDSSKFDLEKKPCNRQHESLSHVRSLERKRTPNVTPLKGTTPANSVGLKQRNLRHDAISGKRRDFDSSSLIVSNVKNRDGRGEPVKVSHNRNNDAVSFTFSAPLKQKMGMLTEEEKINYNNERNKYFERPSPLKVDGLGAFLEEKLKELTSQQNDVPQKSSAVILQELISALSSEHLICHDGHMHNEDAGFLCGAKQENLLGTSCSGNHLSPGSVLEASFSSSSLDESSGRGFHPDSMNFSYSQPEQSEHDDELLDSAASFNKGSISKILAVIINQIPMALQCLYSFGTQFTRSNFNNMKDVLLNAELVLQISNERSEEEIPQLLIHRFLLNELDTMTDDAMWTDFNSFVGYDDSKSRTMLKGFVSDCVVEYLESNCCQYFTSGFNAWTKLPLCIKAENLVEEVKREVKKCACMTEMVPDEIIEWEMSHSLGKWDDFDIEAFEAGVDIDGYILHNLVDEVVVDLVGCKHSSYSF* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3701 939 MobiDBLite consensus disorder prediction 499 513 - -
Tpr6g3701 939 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 9 931 - -
Tpr6g3701 939 MobiDBLite consensus disorder prediction 359 375 - -
Tpr6g3701 939 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 931 - -
Tpr6g3701 939 MobiDBLite consensus disorder prediction 194 219 - -
Tpr6g3701 939 MobiDBLite consensus disorder prediction 478 515 - -
Tpr6g3701 939 MobiDBLite consensus disorder prediction 407 427 - -
Tpr6g3701 939 Pfam DUF761-associated sequence motif 87 113 IPR032795 -
Tpr6g3701 939 Pfam Domain of unknown function (DUF4378) 764 924 IPR025486 -
Tpr6g3701 939 MobiDBLite consensus disorder prediction 352 427 - -
Tpr6g3701 939 MobiDBLite consensus disorder prediction 478 496 - -
Tpr6g3701 939 MobiDBLite consensus disorder prediction 452 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3701 Tpr-Chr6 40845999 40850664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3701 10 929 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.011 8.58e-71 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3701 - - aprc:113861902 1194.49