Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3699 ATGTCTACAACCAGTCACTCATTCATCAATTGCTCAACATTGATCGATGTCGGTTCTGTACAAGATATTGATAAGTCTCATGGTTCATGTGTGCATGATATGGTTAACAGCATCAACACTTACCATATGGAGTGTGATCCTTATAATGTGTTGGGAAGACTGCCTCAGTGTTTTGTTCGGGAATTTGGTGACTTGATTGACACACATGTTATTCTTCAGGATCCTAATAGCAATGAGCTTGAGGTTCGAATTTTGAAAAAGGGTAGTGAGATGTACTTTGAACAAGGATGGATGGTTCTTAGGGACTTTTATAATCTTTGGTTTGGGGCTTGGCTTAAATTTAGATATGTTAATCCCAGACTTTTGGTAATAAGTCTCACTTCAAGGTGGGGTATTGAAGTTCCTTACCCTTTGCACGATCCTCCCTTCAAACATATGTTAGCTACATTTGGTATTCAGCCAAAGATTGATCAATCAACGGTTGCTGGAGTTTCCTCTAATCCAATTGTGCCAACTAGATCATTTACCCGTTCTTATTTTAAGAAGTTGACATCCTATGATGTTGAGTCTGGTATTTTGATTTTACCTTGGTATGGTTTTGGCGAATTTGCATTCGCATTTACATTCTCCCATATAGTATTGGTTGATCATATGGGATGTCGATATCCATGTAGTCTGGAGTTTAGCGTTGATGATGATGGTGAATTGGCTTGCAAGGTTTCTGGTTATTGGATGGAATTTTGCAAAAAACATCACTTAATCCAGGGCAATAGGATTCGATTTGCTGTCAATGAACCTGCATTAAATTATGTCATGTATGTCTGTGTTTATCCTCAACTAGGAACAGAAACAACCCTTAGTTATCCTTTGAGTGATGGCTCTTATCTCCCTCTATATGTATCCCAGCAATATTTTGTGGCCTCTTCATGA 930 0.3839 MSTTSHSFINCSTLIDVGSVQDIDKSHGSCVHDMVNSINTYHMECDPYNVLGRLPQCFVREFGDLIDTHVILQDPNSNELEVRILKKGSEMYFEQGWMVLRDFYNLWFGAWLKFRYVNPRLLVISLTSRWGIEVPYPLHDPPFKHMLATFGIQPKIDQSTVAGVSSNPIVPTRSFTRSYFKKLTSYDVESGILILPWYGFGEFAFAFTFSHIVLVDHMGCRYPCSLEFSVDDDGELACKVSGYWMEFCKKHHLIQGNRIRFAVNEPALNYVMYVCVYPQLGTETTLSYPLSDGSYLPLYVSQQYFVASS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3699 309 SUPERFAMILY DNA-binding pseudobarrel domain 176 275 IPR015300 -
Tpr6g3699 309 SUPERFAMILY DNA-binding pseudobarrel domain 53 124 IPR015300 -
Tpr6g3699 309 Gene3D - 31 128 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3699 Tpr-Chr6 40812027 40813946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3699 53 140 B3 DNA Binding Superfamily AT1G49475 31.818 1.34e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3699 - K25636 mtr:MTR_4g117740 69.707