Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3673 ATGGCGCTATGGATGGAAAAGGGTTCAGAGCCCTTGACCGAAAACGAGAAAGCAGACCTTGAAGCCATTGCTGCAATCAAAGAGTCTGCGGCCTTAGAACTCAAGGAAAAGGGTAATCAATATGTGAAGATGGGTAAGAAACATTACTCTGATGCTATTGATTGCTACACAAGGGCAATTAATCAGAAAGCTTTGAGTGATTCCGAGACTTCCATTCTTTTTTCAAATAGAGCCCATGTCAATTTGTTGCTTGGAAATTTTAGAAGAGCTCTTACTGATGCTAATGATGCACTCAAATTGAACCCTTCAAGTATAAAGGCAATTTATAGAGCTGCCAAAGCTTCTATTTCATTGAATTTGTTGGATGAAGCACAAGACTATTGTCAAATGGGTCTTCATTTGGACCCTAAAAATGAGGAATTGAAGAAGCTTGATAACCAGATTGGTCTTAAGATCTTGGACAATGAAAAGCATGAGGCTCAAGTTTCTAAGGCTATTGCTGAGGCAAAGGAAATTGTTTCTGCAACGGAAAATAGAGGCTTGAAGATTGGAAAGGCCATGTATCGAGAACTTACTGGATTAAAGAAGCCTGTGTTGGACAAAAGTAATATCCTTCACTGGCCTGTTCTTCTATTGTATGCAGAGGTCATGTCCAGTGACTTCATTGAAGATTTCTGCGAGACCGACATGTTTTCAGTTCACCTTGATATGGTATTCGCAGATGATCAACCGCTTCCATGGGATGTTGAAAACAACTACAAACGTGAATTTATAGAGTTGTACTATGAGGCTGGTTTGGGACTTCGTCTATCCAAGGAAAAACTCCTCCGTTATTTATTAGAGGGAACTGCAGCAGCTTCTAATGGGGAAGGTATTGGTGATGATGAGAAAGATGCAGTTGACAATCTTAAGCAAAACCAGAGCTCCCCAAAATGGATCAAAGTAAATGAAAGGAGAACTCTCCATGATGTTCTGAAAGAGCCAAATTTCATCATTCCTGAGATACCAGTCTTCTATGTTGTTTCTAAGCAATCCAGCTTTTATAAAAAATTCAAAGATGGAAAGTGGGCTCCTCCAAGTGCATGA 1086 0.3987 MALWMEKGSEPLTENEKADLEAIAAIKESAALELKEKGNQYVKMGKKHYSDAIDCYTRAINQKALSDSETSILFSNRAHVNLLLGNFRRALTDANDALKLNPSSIKAIYRAAKASISLNLLDEAQDYCQMGLHLDPKNEELKKLDNQIGLKILDNEKHEAQVSKAIAEAKEIVSATENRGLKIGKAMYRELTGLKKPVLDKSNILHWPVLLLYAEVMSSDFIEDFCETDMFSVHLDMVFADDQPLPWDVENNYKREFIELYYEAGLGLRLSKEKLLRYLLEGTAAASNGEGIGDDEKDAVDNLKQNQSSPKWIKVNERRTLHDVLKEPNFIIPEIPVFYVVSKQSSFYKKFKDGKWAPPSA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3673 361 Gene3D Tetratricopeptide repeat domain 25 152 IPR011990 GO:0005515
Tpr6g3673 361 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 357 - -
Tpr6g3673 361 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 1 357 - -
Tpr6g3673 361 SUPERFAMILY TPR-like 22 143 IPR011990 GO:0005515
Tpr6g3673 361 SMART tpr_5 71 104 IPR019734 GO:0005515
Tpr6g3673 361 SMART tpr_5 31 66 IPR019734 GO:0005515
Tpr6g3673 361 SMART tpr_5 105 138 IPR019734 GO:0005515
Tpr6g3673 361 ProSiteProfiles TPR repeat profile. 71 104 IPR019734 GO:0005515
Tpr6g3673 361 Pfam Cns1/TTC4 Wheel domain 201 264 IPR044059 GO:0051879
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3673 30 161 Calmodulin-binding Proteins AT3G25230 30.070 3.11e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3673 K24927 - gmx:100783179 598.201