Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3670 ATGGTACCTAAATTAATCAAGAAGAATCTAGCATGTGGGCAGATTCTCTTCATAATCCTTTGGGTCCTTTTAACAATCTTTTTTCCTCAAATTGCTGGTTTTTCCAAAATCACTTCTTTGACCACAACTTCTCATTATCAAGCTAACCTTGAAGACCTTGAAGCAAAAGCTCTGCTGAAGTGGAAAGATAGCTTCGAAAACCACAGCCAAGCTCTTTTGTCAACATGGACAAGAACCACAAATCCATGCAAATGGGAAGGAATTCGGTGTGACAAATCCAAATCCATCTCTAGCATAAATCTTGAAAATTATGGACTTAAAGGTACACTTCACACTCTAAACTTCACCTCATTCCCCAACCTTCTCAGCCTAAATATCTACAACAACTACTTTTATGGGACCATTCCTCCACAAATTGGTAACATGTCCAAAATAAATGTTTTGAACTTTTCATTAAACCCACTTGAAGGTTCCATCCCCAAAGAAATGTGGAAATTGACAAGTTTAAAAGGCCTTGATCTTTCTGTATGTCAGCTAAGTGGAGAAATTCCTAATTTCATAACAAACTTGTCCAACCTCTCGTATCTAGATTTTAGTAACAACAAAAAGTTTTCCAGTGGTTACATTCCTCATGAGATTGGGAAATTGAACCACTTGAAATATCTAGGTATTGCAGGTTGTAGCCGTGTTGGTCCCATTCCCCAAGAAATTGGAATGTTGACAAACCTTGGTGTTATGGATTTGTCAAGGAACACTCTATCTGGTACCATCCCAAAAACATTTGGTAACATGACCAGTTTAAATGAACTTTACCTTTCCAATAACACATTGTCTGGAACAATTCCACCATCATTTTGGAACATGTCTTACTTGTCCATACTCTACCTTGATACCAATAATCTTTCTGGATCGATCCCTCCTTCTATACAAAACTTGGTCAATTTGAATGATCTTGCATTTCATTACAACCACTTTTCTGGACCTATTCCTTTCACCATCGGAAACTTGACAAAGCTAACATCTTTAAACTTGATGTCTAATCATTTTTTTGGATCAATTCCTACTTCTATTGGAAATTTAATCAATATGGAAGTCCTATGTTTCCGAGAAAACAATCTTTCTGGAACTATTCCTGCTATAATTGGAAATTTGACAAAGCTAACTGGTTTGGAATTAGCCACCAATAAATTTCATGGTAGCATTCCACAACGCCTACATAACTTTACCAACTGGGGATCCTTTATATTAGACGAGAATGATTTCATTGGTCAGTTGCCACCTCAAATATGTTCTGGTGGATTTCTACTATTCTTCACTGTTTTTAACAACCATTTCACCGGTCAAGTACCAAGAAGCTTGAAAAACTGCTCTAGTATTCAAAGACTTATGCTTCAGGGTAATCAAATAGAAGGAGATATAGCACAAGATTTTGGTGTATATCCGAATTTGGAGTACATTGATCTAAGTGACAATAAATTTTATGGTCAAATTTCACCAAACTGGGGACAGTGCCCTAATCTTAATACCTTAATGATATCCAACAATAATATCACTGGTGGTATACCATTAACACTTTTGGAGGCAAACAAGCTAGGCAAGCTCCACCTTTCTTCAAACCATTTAACAGGAAAACTTCCAAAGGAACTTGGATACCTGAAATCATTACTTGAAGTTAAGATCAACAACAATCATCTTTCAGGAAATATTCCAAGTGAAATTGGATTGCTACAGAATCTTGTAGATTTCGATGTAGGAAGAAACATGTTGAATGGGACAATACCAAAAGAAGTTGTGAAGTTACCCTTGTTACGAAATTTGAACTTGAGCAAAAACAAAATTGAAGGGAGAATTCCATCAGACTTTTCAATGTCACAACCTCTTGAATCTCTTGATCTTAGCGGGAATTTGTTGAATGGAACAATACCAACAGTGTTAGGAGAGTTGAAGCAATTGCAACAACTGAATCTGTCATCCAATAATCTTTCTGGCACCATTCCATCCAGTTTTGAGGATGCCATGTCAAGCTTGACCTATATCAACATCTCAAACAACCATTTAGAAGGCAGGCTACCAAATAATCAAGCTTTTCTCAAGGCTCCAATTGAATCATTAACAAATAACAAAGGCTTGTGTGGTAATCGCACTGGCTTACTGCTTTGCACAACCAACCACAGCAAAAAGAGCCACAAGACTCTCTTACTAGTATTGTTTGTTATCTTAGGTGCTCTACTACTAGTATTTTGTGGGGTGGGAATTTCAATGTATATTCTTTATCGGAGAGCAACAAAGGAAAAAACCAAAGATAAAGATTCCAACGAAGCACAAGCAGAAGAAGTATTTTCCATATGGAGCCATGATGGAAAAATGTTATTTGAAAACATCATTGAAGCTACCAATAACTTTGATGATGATTATCTCATTGGAGTTGGCGGGGAAGGATCTGTTTATAAGGCTAAGTTGTCTACAGATATGGTTGTTGCAGTCAAGAAACTTCATTCGGGAATAGATGGGGAGAGGCCCAATTTCAAAGCATTTGAAAATGAAATTCAAGCTTTGACAGAAATCAGGCATCGTAATATCATAAAGCTCTATGGATATTGCCAACATTCAAGATTTTCATTTTTGGTTTATAAGTTCTTGGAAGGGGGAACTTTGGCAAAAATGCTAAACAATGACTCGCAAGCTATTGCATTTGATTGGGAAAAGAGGGTAAATGTTGTTAGAGGTGTGGCTAATGCTTTGTCCTATATGCATCATGATTGCACACCTTCAATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTTTGGATTTATCTTATGAAGCTCAACTTTCGGATTTTGGAACAGCTAAGTTTCTAAAGCCTAATTCAAGCAGTTGGACCACATTTGCAGGCACCTTTGGGTATGCAGCTCCAGAGTTTGCCCAGACCATGGAAGTGACTGAGAAGTGTGACGTTTACAGCTTTGGAGTACTTTGTTTTGAAATCCTTCTGGGAAACCATCCAGCAGATTTTGTTTCTTCATTGTTCTCATCATCTACAGCAACAACGACTTATAATTTGTTGTTGATTGATGTATTAGACCAACGCCCTCCTCAACCTACCAATTCATTTTTTGGCGATATCATCTTGATTACAAAATTGGCATTTTCTTGCTTAAGTGGAAATCCATCTTCTCGCCCCACCATGGATTATGTCTCAAAAGAACTTTTAATGAGAAAATCACAATCGCCTTTAGTGGAACAGTTCCCTCAGATCAGACTTGGACAACTCCACTAA 3282 0.372 MVPKLIKKNLACGQILFIILWVLLTIFFPQIAGFSKITSLTTTSHYQANLEDLEAKALLKWKDSFENHSQALLSTWTRTTNPCKWEGIRCDKSKSISSINLENYGLKGTLHTLNFTSFPNLLSLNIYNNYFYGTIPPQIGNMSKINVLNFSLNPLEGSIPKEMWKLTSLKGLDLSVCQLSGEIPNFITNLSNLSYLDFSNNKKFSSGYIPHEIGKLNHLKYLGIAGCSRVGPIPQEIGMLTNLGVMDLSRNTLSGTIPKTFGNMTSLNELYLSNNTLSGTIPPSFWNMSYLSILYLDTNNLSGSIPPSIQNLVNLNDLAFHYNHFSGPIPFTIGNLTKLTSLNLMSNHFFGSIPTSIGNLINMEVLCFRENNLSGTIPAIIGNLTKLTGLELATNKFHGSIPQRLHNFTNWGSFILDENDFIGQLPPQICSGGFLLFFTVFNNHFTGQVPRSLKNCSSIQRLMLQGNQIEGDIAQDFGVYPNLEYIDLSDNKFYGQISPNWGQCPNLNTLMISNNNITGGIPLTLLEANKLGKLHLSSNHLTGKLPKELGYLKSLLEVKINNNHLSGNIPSEIGLLQNLVDFDVGRNMLNGTIPKEVVKLPLLRNLNLSKNKIEGRIPSDFSMSQPLESLDLSGNLLNGTIPTVLGELKQLQQLNLSSNNLSGTIPSSFEDAMSSLTYINISNNHLEGRLPNNQAFLKAPIESLTNNKGLCGNRTGLLLCTTNHSKKSHKTLLLVLFVILGALLLVFCGVGISMYILYRRATKEKTKDKDSNEAQAEEVFSIWSHDGKMLFENIIEATNNFDDDYLIGVGGEGSVYKAKLSTDMVVAVKKLHSGIDGERPNFKAFENEIQALTEIRHRNIIKLYGYCQHSRFSFLVYKFLEGGTLAKMLNNDSQAIAFDWEKRVNVVRGVANALSYMHHDCTPSIVHRDISSKNVLLDLSYEAQLSDFGTAKFLKPNSSSWTTFAGTFGYAAPEFAQTMEVTEKCDVYSFGVLCFEILLGNHPADFVSSLFSSSTATTTYNLLLIDVLDQRPPQPTNSFFGDIILITKLAFSCLSGNPSSRPTMDYVSKELLMRKSQSPLVEQFPQIRLGQLH* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3670 1093 Gene3D Transferase(Phosphotransferase) domain 1 880 1083 - -
Tpr6g3670 1093 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 268 1092 - -
Tpr6g3670 1093 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 198 - -
Tpr6g3670 1093 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 193 267 - -
Tpr6g3670 1093 Gene3D Ribonuclease Inhibitor 304 409 IPR032675 -
Tpr6g3670 1093 SMART LRR_typ_2 240 263 IPR003591 -
Tpr6g3670 1093 SMART LRR_typ_2 336 360 IPR003591 -
Tpr6g3670 1093 SMART LRR_typ_2 648 671 IPR003591 -
Tpr6g3670 1093 SMART LRR_typ_2 118 142 IPR003591 -
Tpr6g3670 1093 SMART LRR_typ_2 673 698 IPR003591 -
Tpr6g3670 1093 SMART LRR_typ_2 552 576 IPR003591 -
Tpr6g3670 1093 SMART LRR_typ_2 264 287 IPR003591 -
Tpr6g3670 1093 SMART LRR_typ_2 600 623 IPR003591 -
Tpr6g3670 1093 Pfam Protein kinase domain 804 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3670 1093 PANTHER LRR RECEPTOR-LIKE KINASE 14 198 - -
Tpr6g3670 1093 PANTHER LRR RECEPTOR-LIKE KINASE 193 267 - -
Tpr6g3670 1093 PANTHER LRR RECEPTOR-LIKE KINASE 268 1092 - -
Tpr6g3670 1093 Pfam Leucine rich repeat 627 686 IPR001611 GO:0005515
Tpr6g3670 1093 Pfam Leucine rich repeat 242 301 IPR001611 GO:0005515
Tpr6g3670 1093 ProSiteProfiles Protein kinase domain profile. 801 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3670 1093 Pfam Leucine rich repeat N-terminal domain 54 91 IPR013210 -
Tpr6g3670 1093 SUPERFAMILY L domain-like 74 426 - -
Tpr6g3670 1093 Gene3D Phosphorylase Kinase; domain 1 760 879 - -
Tpr6g3670 1093 Gene3D Ribonuclease Inhibitor 206 303 IPR032675 -
Tpr6g3670 1093 Gene3D Ribonuclease Inhibitor 51 205 IPR032675 -
Tpr6g3670 1093 ProSitePatterns Tyrosine protein kinases specific active-site signature. 925 937 IPR008266 GO:0004672|GO:0006468
Tpr6g3670 1093 Gene3D Ribonuclease Inhibitor 410 721 IPR032675 -
Tpr6g3670 1093 SUPERFAMILY Protein kinase-like (PK-like) 786 1072 IPR011009 -
Tpr6g3670 1093 SUPERFAMILY RNI-like 371 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3670 Tpr-Chr6 40370161 40374202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3670 37 973 Receptor kinase-like Gene Family AT4G08850 44.000 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr6g3670 Pkinase 3.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3670 - - gmx:100815688 1444.87