Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3669 TACTTGGGAGCACATTCTCATGGTCATGGCCCTCACCCTACATCTGTTGAACTTGAAATTGCTACTAATTCTCATTATGATTTACTAAGTTCAACCTTGGGAAGCCGGGAGAAAGCAAAAGAAGCAATAATTTATTCATATAACAAACACATCAATGGCTTTGCTGCGTTACTTGAAGAGGAACAAGCAACATATATTGCAAAAAAAGTAAATGTAGTGTCAGTGTTCTTGAGCAAATCTCATAAACTGCACACTACAAGGTCATGGGAATTTATTGGACTACAAAGAAACGGTAAGAGTACTGCATGGCAAAAGGGGAAGTTTGGTGAAAATACAATAATCGTAAACATTGACTCGGGTGTTTGGCCGGAATCCCAGAGTTTTATCGAGAAAGGATTTGGACCTATCCCATCAAAATGGCATGGAGGAAAAGCATGTCAAATTAGTCAATTCGGAAAACTCAAGAAAAATCCTTGCAACAGTGATGGTGTTGATATATTATCACTTTCAGTTGCTGGCCAATATCTTGTCTATCCTGAAGATATTTTCACAGATGAGGTTTCAATAGGTGCATTCCATGCACTTTCTAGAAACATATCAGTAGTTGCCTCTGCAGGGAACGATGGACCAACCGAAGGAAGCGTGGTGAATATAGCTCCATGGGTATTCACAATTGCTGCTATCACGGGAGCTAGTCTTTTTGTAACCTTACCGCCTAATAAGTCGTTTTCTCTGATTCTTGGTACGGATGGTAAACTTGCCAATGCGACAGATCGTGCTGCGCGACTTTGTAGGCCCGGAACACTTGATCCTTCAAAAGTGAAGGGCAAAATAGTGGGATGTGATCGAGAAGGAAATATAAAATCAGTTGCTGAGGGTCAGGAAGCTTTATCAGCAGGTGCCAAGGGAATGCTTTTGAGCAATCGACCACAACAAGGGAAAACAACTCTTGCTGAGCCTCATGTTTTGTCTTGTGTGGGTAACGGGCAAGATGAAAACACTCCAGTTATTATCAATACAACAGAACCTGCAGGGTCACATGCTGCTTATGACATAACTTCCATGGACTCTAAATTAAAGTCGGGTACCACAATAAGGTTTTCAGGAGCAAAAGTATTGTATGGAAGAAAGCCAGCTCCAGTAATGGCTTCATTCTCATCTAGAGGACCAAATAAGATTCAGCCGTCAATACTCAAGCCTGATGTAACTGCACCAGGTGTGAACATACTTGCTGCCTATTCATTGTTTGCAAGTGCATCCAACTTAGTAACAGACAATCGCACAGGTTTTCCATTCAATGTTATGCAAGGAACTTCTATGTCTTGCCCTCATGTGGCCGGCATTGCAGGACTTCTCAAAACATTGCATCCTAATTGGAGTCCAGCAGCTATTAAATCGGCTATCATGACCACAGCAACCACACTAGATAAGACAAACAGACCAATTCAAGATGCATTTAAAAAAAAACAAGCAACTCCCTTTGCTTATGGTTCAGGGCATGTTCAACCTGACCTTGCAATAGATCCTGGACTTGTTTATGATCTAGGCATTAAGGATTACTTGAATTTCCTATGTGCTTATGGATACAACCAACAACTTATTTCAGCACTTAATTTCAATGGTACATTTGTTTGTTCCGGATCTCACAGCATAGAAGACTTTAACTACCCTTCAATCACGTTACCGAATCTTGGGTTAAATGTCGTTAATGTCACTCGGACGGTCACCAATGTTGGGTCACCCGGCACATATGTAGCAAAAACCCAATTGACTGGATATAAAATTGCCGTTGTACCAAACTCCTTGACTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTGTGCAGGCAACAAATGTGACTCCACGGAAGAAATATCAATTTGGAAATTTGCAATGGACAGATGGAAAACACATTGTAAGGAGTCCTATCACCGTTAAGCGCAAATAA 1956 0.4085 YLGAHSHGHGPHPTSVELEIATNSHYDLLSSTLGSREKAKEAIIYSYNKHINGFAALLEEEQATYIAKKVNVVSVFLSKSHKLHTTRSWEFIGLQRNGKSTAWQKGKFGENTIIVNIDSGVWPESQSFIEKGFGPIPSKWHGGKACQISQFGKLKKNPCNSDGVDILSLSVAGQYLVYPEDIFTDEVSIGAFHALSRNISVVASAGNDGPTEGSVVNIAPWVFTIAAITGASLFVTLPPNKSFSLILGTDGKLANATDRAARLCRPGTLDPSKVKGKIVGCDREGNIKSVAEGQEALSAGAKGMLLSNRPQQGKTTLAEPHVLSCVGNGQDENTPVIINTTEPAGSHAAYDITSMDSKLKSGTTIRFSGAKVLYGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLVTDNRTGFPFNVMQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTATTLDKTNRPIQDAFKKKQATPFAYGSGHVQPDLAIDPGLVYDLGIKDYLNFLCAYGYNQQLISALNFNGTFVCSGSHSIEDFNYPSITLPNLGLNVVNVTRTVTNVGSPGTYVAKTQLTGYKIAVVPNSLTFKKIGEKKTFQVIVQATNVTPRKKYQFGNLQWTDGKHIVRSPITVKRK* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3669 651 SUPERFAMILY Subtilisin-like 83 511 IPR036852 GO:0004252|GO:0006508
Tpr6g3669 651 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 161 650 IPR045051 -
Tpr6g3669 651 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 160 IPR045051 -
Tpr6g3669 651 Pfam Fibronectin type-III domain 553 648 IPR041469 -
Tpr6g3669 651 CDD PA_subtilisin_like 228 326 - -
Tpr6g3669 651 ProSitePatterns Serine proteases, subtilase family, serine active site. 437 447 IPR023828 -
Tpr6g3669 651 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 161 650 - -
Tpr6g3669 651 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 1 160 - -
Tpr6g3669 651 Pfam Peptidase inhibitor I9 22 84 IPR010259 -
Tpr6g3669 651 Gene3D - 524 650 - -
Tpr6g3669 651 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 84 IPR037045 -
Tpr6g3669 651 ProSiteProfiles Serine proteases, subtilase domain profile. 1 507 - -
Tpr6g3669 651 PRINTS Subtilisin serine protease family (S8) signature 109 128 IPR015500 -
Tpr6g3669 651 PRINTS Subtilisin serine protease family (S8) signature 436 452 IPR015500 -
Tpr6g3669 651 Gene3D - 231 374 - -
Tpr6g3669 651 Pfam Subtilase family 161 481 IPR000209 GO:0006508|GO:0008236
Tpr6g3669 651 Gene3D Peptidase S8/S53 domain 161 520 IPR036852 GO:0004252|GO:0006508
Tpr6g3669 651 Gene3D Peptidase S8/S53 domain 85 159 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3669 Tpr-Chr6 40348696 40356104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3669 162 649 Subtilisin-like Serine Gene Family AT2G04160 46.771 1.42e-130 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3669 - - gmx:100813564 683.33