Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3658 ATGAACAAGTGTCTAGGATCACTATGCATACTTTTGTTGCTTCTCTTAGTTGAAGCTGCCCCTCAAGGATCTCTCATCACACAACTCCCTGGTTTCAATGGCAAATTCCTCTCCAACCATTACTCAGGGTATATAAGTATTGATGGAAATGCTGAAAATGGGAAGAACTTGTTCTACTACTTTGCTAGTTCAGAAAGAAATCCAAGTAAGGATCCGGTTGTTCTATGGCTCAATGGTGGACCTGGGTGTTCTAGCTTTGATGGCTTTGTTTATGAACATGGGCCATTCAATTTCGTGGCTGCAAAATCAAAAGAGAAGCTACCCACTTTGCATAACAATCCTTACAGCTGGTCAAAGGTTTCCAATATTATATATTTGGATTCACCCACGGGTGTTGGCTTGTCTTACTCAAAGAACACAACCAAATACTCAACTGGGGACGTACAAACTGCTTCTGATACCCATGCTTTTCTCTTAAAGTGGTTTGAGGAATTTCCAGAATTCCAGGCTAATCCATTTTATGTTTCTGGGGAGTCTTATGCTGGAATTTACGTACCCACTCTAGCTTTTGAAATTGCTAAAGGAATCCGGAGTCTTACAAAGCCCGTGATCAATTTGAAGGGTTACTTAGTGGGAAATGGTGTCACGGACCCAACATTTGATGACAATGCTTTTATCCCATTTGTGCACGGAATGGGCCTCATATCAGACGCTATTTATGAGGATGTACAAGCTAATTGCAAAGAAAATTACAACTACGATTCTAATACCGGGGATGATACATGCTCTAAGAGCATGGAAAAAGTTGATAGGGCTGTTGATGGTCTTAATGTGTACAACATATTAGAGCCATGCTACCATGATCCTGAAGTTGCAAGAAACAAAAGCTCTAACTTGCCATTGAGTTTCCAAAATTTAGGGAAAACAGAGAGACCTCTCCCAGTGAGAAAGAGGATGTTTGGTAGAGCTTGGCCTTTTAGAGCACCAGTCAGAGATGGTCCTGTTACCCTATGGCCTCAATTAATGGCTAACAATTTGGGACATGTCCCTTGTCTTAATGATGAAGTAGCAATCGCTTGGCTAAACAACGTTGACGTAAGGAAAGCCATTCATGTTAATGAGGCAAGTGATAGGTGGGAATTATGTTCAGATAGAATACGTTACGAGCATGATGCTGGAAGCATGATTCCTTACCACAAGAATCTAACAAGATTGGGATATAGAGCACTTATTTTCAGTGGTGACCATGATATGTGTGTACCATTTACTGGAAGTGAGGCTTGGACAAGATCTTTGGGATACAAGATTGTGGATGAATGGAGACCATGGAACTCTAATGACCAAGTTGCTGGGTACTTACAAGCATACGAGAACAACCTTACCTTCCTCACAGTTAAGGGAGCTGGGCACACCGTACCGGAATATAAGCCACGGGAGGCACTGGATTTTTACGGTCGTTGGTTGGAAGGAAAACCAATATAA 1482 0.417 MNKCLGSLCILLLLLLVEAAPQGSLITQLPGFNGKFLSNHYSGYISIDGNAENGKNLFYYFASSERNPSKDPVVLWLNGGPGCSSFDGFVYEHGPFNFVAAKSKEKLPTLHNNPYSWSKVSNIIYLDSPTGVGLSYSKNTTKYSTGDVQTASDTHAFLLKWFEEFPEFQANPFYVSGESYAGIYVPTLAFEIAKGIRSLTKPVINLKGYLVGNGVTDPTFDDNAFIPFVHGMGLISDAIYEDVQANCKENYNYDSNTGDDTCSKSMEKVDRAVDGLNVYNILEPCYHDPEVARNKSSNLPLSFQNLGKTERPLPVRKRMFGRAWPFRAPVRDGPVTLWPQLMANNLGHVPCLNDEVAIAWLNNVDVRKAIHVNEASDRWELCSDRIRYEHDAGSMIPYHKNLTRLGYRALIFSGDHDMCVPFTGSEAWTRSLGYKIVDEWRPWNSNDQVAGYLQAYENNLTFLTVKGAGHTVPEYKPREALDFYGRWLEGKPI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3658 493 SUPERFAMILY alpha/beta-Hydrolases 26 492 IPR029058 -
Tpr6g3658 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 460 477 IPR033124 GO:0004185
Tpr6g3658 493 Gene3D - 348 493 - -
Tpr6g3658 493 Pfam Serine carboxypeptidase 30 490 IPR001563 GO:0004185|GO:0006508
Tpr6g3658 493 Gene3D alpha/beta hydrolase 19 319 IPR029058 -
Tpr6g3658 493 PANTHER CARBOXYPEPTIDASE 9 492 - -
Tpr6g3658 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 492 IPR001563 GO:0004185|GO:0006508
Tpr6g3658 493 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Tpr6g3658 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Tpr6g3658 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Tpr6g3658 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Tpr6g3658 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 460 473 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3658 Tpr-Chr6 40079672 40094006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3658 356 493 Calmodulin-binding Proteins AT2G22960 48.921 1.54e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3658 K16296 - gmx:100790895 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3658 6 40079672 40094006 Tpr5g1368 5 26494717 26497301 PCT