Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3648 ATGGAGCTTCATTACTATATTCTTCAACTCACAGTCCTGTTCCTAAGTATGTTTCCTCAATCACTCAATTGCCAACAAGTATACCTTAATAACACTGTCTTTGACTGCACTAATACACCTTCTGTACCAAAAGGATACCTCTGCAATGGCCTTAAAAAATCATGCACTTCCTTTTTAGTTTTCAAGTCAAAACATCCCTATGATAGCCCTACAAAAATTGCCTATCTTCTTGGCTCTGAAGCATCAACCTTAGCTTCAATCAACAAGATATCAATAAATGAGAAAATTCCTTCCAATAAATCAATCATAGTCCCTGTCTTCTGTTCGTGTGCTGGAAATATCTACCAGCATAGCACATCTTACTCTGTAAAGGAGAATGATACCTACTTTGAGTTGGTAGAAAAAACTTACCAAGGCCTTACAACCTGCCAGGCAATGATGGGTCAGAATTACTATGCTCCTATCTACATTCCAGTTGGTGCTGAGCTCACAGTTCCAGTACTATGTGCTTGTCCCACAGCAAACCTGACGGCAAGAGGGGTTACCTCCTTGCTAGTTCACATAGTGAACGATGGTGACACAGTTAAGTCCATAGGAGAAGCTTATGGTGTCGATGAAAATAGCATGCGAGAGGCTAATGAGTTGCCTCTGCTAAAAATTGCAAACAGCAGTGTGATCCTCTTTGCAACAACGCCTTTACTAGTTCCTCTGCAAGCCAAGAGTTGCAAAGAGAACCCAGAAAGATTCTATTGCAAATGTTCTGAGGCACTGCATGCAGATGGAAGTTCCGAGCGTCTATTCTGTGATGAATCTCATGGTCAAAAAATCCCTGCAAAATTGGTTGTTGCCTCAGGTATTGGCATTGGTACAGGCTTTCTGTCTTCGTTTCTTCTGGGTTACAAATTATATCAATGCATAAATGAAAAGAGAGAAAAAATCCGTAAGGAAAAGCTGTTCAGGCAAAATGGTGGCTACTTGTTACAAGAGACATTCTCATCCTTTGGAAATGGAGAAATGGCAAAGCTTTTTACGGCAGAGGAGCTGCAAAGAGCGACAGATAACTACAACCTGAGTAGGTTTCTTGGTCAGGGTGGCTATGGCATGGTGTATAAAGGAATGTTACCAGATGGAACCATAGTTGCAGTTAAAAAGTCAAAAGAACTTGAAAGGAACCAGATAGAGACTTTTGTCAATGAAGTGGTCATCTTATCTCAGATCAACCACAGGAACATTGTCAAACTCTTAGGCTGTTGTCTTGAGACAGAAACCCCATTACTAGTTTACGAATATATCCCCAATGGAACTCTTTCCCAACATATACATCGGAAAGACCATGAGTCGTCCCTTTCGTGGGAAAATCGCCTTAGAATTGCGTGTGAGGTTGCTGGAGCAGTGGCATATATGCATTTTTCAGCTTCTATTCCAATCTTCCACAGAGACATCAAACCAACCAACATACTCCTGGACAGTAACTATAGTGCCAAAGTGTCCGATTTTGGGTCATCAAGATCAATACCACTAGATAAGACTCACTTAACCACATTTGTAGGTGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCCAGTCAATTTACAGATAAGAGTGATGTATACAGTTTTGGGGTTGTGCTTGTAGAGCTCATAACCGGTAGAAAGCCGATTTCATTTTATGATGAAGACGAGGGTCAGAATTTGATTGCACATTTCATTTCTGCGATGAAGGAGAACGAACTTTCTCAAATTTTAGATGCCAGAGTGCAAAAGGAAGCAGGGAAAGATGTCATTCTTACCATTTCGAATCTTACAATGAGATGTTTGAGACTTAATGGTAAGAAAAGACCAACAATGAGAGAGGTTTCAGCGGAATTAGAAACACTGAGAAAGGCACAAAGCACCTTCCAAATCAACCATGATCATGATGAGTCGCCACCAAGTGATGAAGAATCATTTGGGCGCACAACTAATGAAACAGACCAAGAATCCAGAGAGGAAAGCATTCCGCTTTACTTACAAACAGAATCTACGTCCTTCTAA 2040 0.4074 MELHYYILQLTVLFLSMFPQSLNCQQVYLNNTVFDCTNTPSVPKGYLCNGLKKSCTSFLVFKSKHPYDSPTKIAYLLGSEASTLASINKISINEKIPSNKSIIVPVFCSCAGNIYQHSTSYSVKENDTYFELVEKTYQGLTTCQAMMGQNYYAPIYIPVGAELTVPVLCACPTANLTARGVTSLLVHIVNDGDTVKSIGEAYGVDENSMREANELPLLKIANSSVILFATTPLLVPLQAKSCKENPERFYCKCSEALHADGSSERLFCDESHGQKIPAKLVVASGIGIGTGFLSSFLLGYKLYQCINEKREKIRKEKLFRQNGGYLLQETFSSFGNGEMAKLFTAEELQRATDNYNLSRFLGQGGYGMVYKGMLPDGTIVAVKKSKELERNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEYIPNGTLSQHIHRKDHESSLSWENRLRIACEVAGAVAYMHFSASIPIFHRDIKPTNILLDSNYSAKVSDFGSSRSIPLDKTHLTTFVGGTFGYIDPEYFQSSQFTDKSDVYSFGVVLVELITGRKPISFYDEDEGQNLIAHFISAMKENELSQILDARVQKEAGKDVILTISNLTMRCLRLNGKKRPTMREVSAELETLRKAQSTFQINHDHDESPPSDEESFGRTTNETDQESREESIPLYLQTESTSF* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3648 679 MobiDBLite consensus disorder prediction 636 679 - -
Tpr6g3648 679 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 658 IPR045274 GO:0007166
Tpr6g3648 679 CDD STKc_IRAK 361 628 - -
Tpr6g3648 679 SMART serkin_6 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3648 679 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Tpr6g3648 679 MobiDBLite consensus disorder prediction 636 665 - -
Tpr6g3648 679 Gene3D Transferase(Phosphotransferase) domain 1 431 650 - -
Tpr6g3648 679 ProSiteProfiles Protein kinase domain profile. 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3648 679 Pfam Protein kinase domain 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3648 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Tpr6g3648 679 SUPERFAMILY Protein kinase-like (PK-like) 337 625 IPR011009 -
Tpr6g3648 679 Gene3D Phosphorylase Kinase; domain 1 330 430 - -
Tpr6g3648 679 Pfam LysM domain 187 223 IPR018392 -
Tpr6g3648 679 PANTHER LYSM TYPE RECEPTOR KINASE 25 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3648 Tpr-Chr6 39915713 39919085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3648 275 632 Receptor kinase-like Gene Family AT1G16130 55.833 2.96e-139 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tpr6g3648 Pkinase 1.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3648 - - gmx:100795455 1013.45