Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3647 ATGAAGCCAAACTTTGTGTTTTCACTTCTCATTACTCCTTTGTTTCTATTAACCCTTCATAGCAATGCTAATACTGCCACATATATAATCCACATGAACAAATCTTTCTCTCCTAAAGTCTTCACAACTCATCATGAATGGTTTAAATCCACCATTAATTCCTTAAAATCAAAAACATTACTACTTGATGATCATGATTATCAATCACATAAGAAACTAGTTTACACCTATGATAATGCCATGTATGGTTTTAGTGCAGTGTTATCTTCAAATGAGTTGGAGACTCTTAACAACATTGATGGTTTTGTTGCAGCATATCAAGACAGAACTGCAACCATTGACACCACACATACCTTTGAATTTCTTTCCCTAGATTCTCCAAGTGGACTATGGCATGCTTCAAATTTCGGAGACGATATCATTGTTGGTGTTATTGATTCTGGTGTTTGGCCAGAGAGTCAAAGCTTTAAAGATCATGGCATGACAAAGAAAATTCCAAACAAATGGAAAGGAACATGTGAATCTGGCCAAGAATTCAATACCTCTATGTGTAACTTCAAATTGATTGGAGCTAGGTATTTCAACAAAGGTGTGATTGCTTCAAATCCAAATGTTACATCAATCTACATGAACTCGGCTAGAGATATAGTAGGACATGGAACTCACACATCATCAACTGTTGCAGGTAACTATGTTAACGGCGCTTCTTATTTTGGTTATGCTAAAGGAGTAGCAAGAGGCATTGCACCAAAAGCTAGGCTTGCTATGTACAAAGTGATTTGGGAAGAGGGTCTTTTGGCTTCTGATGTTTTGGCCGGAATGGACCAAGCAATTATTGATGGTGTTGATGTGATTTCAATTTCAATGGGATTTGATGATGCTCCACTTTATGAAGATCCTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTGTTGTTTCATCTTCAGCAGGTAATGCAGGACCTGACCTTGGAACCTTGCACAATGGTATCCCCTGGCTCATTACTGTTGCTGCAGGCACAGTTGATAGAACTTTTGGCACTCTTGTTTTGGGAAATGGTCAAAACATTATAGGCTGGACTTTGTTTCCATCAAATGCTACTATAGTTGAAAATCTTCCACTTGTTCACAATAACACTTTATCTTCATGCAACTCAATGAAACTCTTATCTCAACTTTACAAACAAGCTATCATTCTTTGTGATGATGACTCAATATCAAATCCAAGATCAGTGTTTGACCAAATCAATCTTGTTGCAGAAACAGGTGTGTTAGGAGCAATTTTTGTCTCAGATAATCCTGATTTAATTGATTTAGGAAATGTTTACTCTCCAATTATTGTAATCAAGCCAAAAGATGCACAATCTGTGATCAAATATGCAAAAAGTAACAAAAATCCAACAGCAAGCATTAAGTTTCAACAAACATTTGTTGGAATAAATCCAGCACCAGCTGCAGCACATTACTCATCAAGAGGTCCTTCACATTACTTTCCATGGATTTTGAAACCTGACATAATGGCACCTGGCTCTAGAGTTCTTGCAGCTTATATTCCTACTAAACCATCAGCTAGAATCGGCACAAATGTGTTCTTATCAAATGACTACAATTTCATGTCAGGAACATCCATGGCTTGTCCTCATGCTTCAGGTGTTGCTGCTCTTCTCAAATCAACACATCCCAAATGGAGTGCGGCTGCTATAAGATCTGCATTAGTAACCACAGCTAATCCTATGGATAATACGCAAAATCCTATACGGGATAATGCGTACCCTTCTCAATATGCTTCTCCGCTAGCTATTGGTGCGGGTGAGATTGATCCTAATAGAGCAATGAATCCAGGTTTGATATATGATGCTACACCACAAGACTATGTTAATCTTCTTTGTGCGTTGAAGTACACGAAGACGCAAATTTTAACAATTACAAGATCAAGTTCTTATGATTGTGAAAACCCTTCTTTTGATCTTAATTACCCTTCATTTATAGCATTATATAGCAATAAAACAACATCAATGGTTCACAAATTTAAGAGAACTGTTACCAATGTTGGAAATGGTGCTGCTACATATAAAGCTAAAGTGATACAACCCAAAGGTTGTGTGGTGACGGTGTCACCTGATATATTAGATTTCAGTTATAGAAATGAGAAACAAAGTTACTACATTAACATAAACATAAAGTATGTTGTGTACAAGAAGAAAAGAGTTTCATTTGGGGATCTTGTTTGGATTGAAGATGGTGGAACACACACTGTTAGAAGTCCTATTGTAGTGGCACCAAGAGGAATTATAGGATTTTAA 2310 0.3693 MKPNFVFSLLITPLFLLTLHSNANTATYIIHMNKSFSPKVFTTHHEWFKSTINSLKSKTLLLDDHDYQSHKKLVYTYDNAMYGFSAVLSSNELETLNNIDGFVAAYQDRTATIDTTHTFEFLSLDSPSGLWHASNFGDDIIVGVIDSGVWPESQSFKDHGMTKKIPNKWKGTCESGQEFNTSMCNFKLIGARYFNKGVIASNPNVTSIYMNSARDIVGHGTHTSSTVAGNYVNGASYFGYAKGVARGIAPKARLAMYKVIWEEGLLASDVLAGMDQAIIDGVDVISISMGFDDAPLYEDPIAIASFAAMEKGIVVSSSAGNAGPDLGTLHNGIPWLITVAAGTVDRTFGTLVLGNGQNIIGWTLFPSNATIVENLPLVHNNTLSSCNSMKLLSQLYKQAIILCDDDSISNPRSVFDQINLVAETGVLGAIFVSDNPDLIDLGNVYSPIIVIKPKDAQSVIKYAKSNKNPTASIKFQQTFVGINPAPAAAHYSSRGPSHYFPWILKPDIMAPGSRVLAAYIPTKPSARIGTNVFLSNDYNFMSGTSMACPHASGVAALLKSTHPKWSAAAIRSALVTTANPMDNTQNPIRDNAYPSQYASPLAIGAGEIDPNRAMNPGLIYDATPQDYVNLLCALKYTKTQILTITRSSSYDCENPSFDLNYPSFIALYSNKTTSMVHKFKRTVTNVGNGAATYKAKVIQPKGCVVTVSPDILDFSYRNEKQSYYININIKYVVYKKKRVSFGDLVWIEDGGTHTVRSPIVVAPRGIIGF* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3647 769 PANTHER OS01G0868800 PROTEIN 28 762 - -
Tpr6g3647 769 Pfam Fibronectin type-III domain 658 761 IPR041469 -
Tpr6g3647 769 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Tpr6g3647 769 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Tpr6g3647 769 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Tpr6g3647 769 Gene3D - 345 480 - -
Tpr6g3647 769 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Tpr6g3647 769 Gene3D - 631 763 - -
Tpr6g3647 769 CDD Peptidases_S8_3 112 579 IPR034197 -
Tpr6g3647 769 SUPERFAMILY Subtilisin-like 114 618 IPR036852 GO:0004252|GO:0006508
Tpr6g3647 769 Pfam Subtilase family 137 591 IPR000209 GO:0006508|GO:0008236
Tpr6g3647 769 Pfam Peptidase inhibitor I9 27 111 IPR010259 -
Tpr6g3647 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 762 IPR045051 -
Tpr6g3647 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 113 IPR037045 -
Tpr6g3647 769 Gene3D Peptidase S8/S53 domain 139 627 IPR036852 GO:0004252|GO:0006508
Tpr6g3647 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Tpr6g3647 769 CDD PA_subtilisin_like 350 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3647 Tpr-Chr6 39887275 39890282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3647 14 759 Subtilisin-like Serine Gene Family AT2G05920 41.199 1.05e-180 534