Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3641 ATGGAAAGCCAAGACCCACCAAACCCACCGCCACCATTAATGATGCCGCCGCCGCCACCACAACCTCAAAACAACACCTTCTTCTTTACTCCTTTACAAAATTACCCTATGGAATCTCAAGATCAAGGTCTTGGTGATATTGATTGGGGCAATTTTTTCTTAGGTCAAAATAATAACAACTTACTTGTTGGGGATGCTAAGGAGATATTAATGGATAATATTCAATGCACATCTTCTTGTTCTAATTTGTTGGTGAGTAATAATGAAAGTGGAAGTTATAAAGTGCATGAGGAAGAAAAAGGAAACAAAGAGGAGAAAAGGGTTAAAGGTGGGAGATTGAAGAAGACAAAAGTACCAAGGTTTGCATTTCAGACAAGAAGTGTTGATGATATTTTGGATGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAATAGCACATATCCCAGAAGCTACTATCGATGCACGCATCACACTTGCAATGTGAAGAAACAAGTGCAAAGGCTATCTAAAGACACTAGCACTGTGGTGACTACTTACGAGGGAATTCATAACCACCCATGCGAGAAGCTCATGGAAACCCTAACTCCTCTTCTAAAGCAAATACAATTTCTTGCTAGCTTGTAA 636 0.3947 MESQDPPNPPPPLMMPPPPPQPQNNTFFFTPLQNYPMESQDQGLGDIDWGNFFLGQNNNNLLVGDAKEILMDNIQCTSSCSNLLVSNNESGSYKVHEEEKGNKEEKRVKGGRLKKTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSTVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3641 211 Pfam WRKY DNA -binding domain 133 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g3641 211 SMART WRKY_cls 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g3641 211 ProSiteProfiles WRKY domain profile. 127 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g3641 211 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 75 207 - -
Tpr6g3641 211 Gene3D WRKY domain 117 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g3641 211 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 75 207 IPR044810 GO:0003700
Tpr6g3641 211 SUPERFAMILY WRKY DNA-binding domain 126 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3641 Tpr-Chr6 39684637 39689153 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3641 109 211 WRKY Transcription Factor Family AT5G41570 74.528 2.52e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g3641 WRKY 5.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3641 - - cam:101497701 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3641 6 39684637 39689153 Tpr6g3641 6 39684637 39689153 ECH