Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3636 ATGGAAGATTGGGATCTCCATGCGGTGGTTAGAGGTTGCTCCACTGTAACCTCCACCACTTCAACCACTACAGCTACATCCTCTGTTTTTCCCCTGCATCATGACCCTTCTTGTGGCTTCTCATCTATGTTTGGTGGTGAACAAAAACCTCAAATTTTGTCACTTTCTACACACCCTTTTGAAGCTAAAAGCTCCTCCATTGAAGAGTTGCATGAACTTTGCAAACCTTTCTTTTCTAGATCACAACCTATCTCTTTGCAAACTTCTCCTCTGTTTTCCTCATTCTCTTATTCCTCTGCATCACCCAAATTAGCTCAAACACAAGACAGACAACAGCAACAACAACACAGAAGTAAGCAACCACATCAAGGTGGTTCTTCTGTCACCAACCAAAGATCAAAAAGAAGGAAAAACCAACTTAAGAAAGTTTGTCAAGTACCTGTTGAGAATCTCTCTTCAGACATATGGGCATGGAGGAAATATGGACAAAAACCCATAAAAGGGTCACCATATCCAAGGGGATATTATAGATGTAGCAGTTCAAAAGGGTGTTTAGCAAGAAAACAAGTTGAAAGAAACAGATCAGATCCAACAATGTTCATAGTAACATATACATCTGAACACAACCATCCTGCTCCTACTCATAAAAACTCTCTTGCTGGTTCAACACGCCAGAAGCCATTAACACCTCCTCAAGCTGAAACCAACAAAGAAGATCAATCTGAGAAAGAGGATCTTACAAAACCCTCTTCTCCTGCTACATCAGGAGGTGAAGAAGAGGTTCAAATTCAAGGAGAAAAGTCAGAGAGCAGAGAAGAAAAAGAAGATTGTTTTATGGAGGAGGATGAAGAAGGAGATGAATTTGGGAGTTTAGATGATGTTGTTTTAACAGATGATTTCTTTGAAAATTTAGATGAACTTAATCAACTAGCTGGTGGTTCTGGAGATTGTTTCCTAGATCCATTTTCTTCAGCCATTGCAATTCCTAATTGGGTGGCCAATAGTGCTGCTGCTACAGCTGCAGGTGGTAGCTGA 1035 0.4048 MEDWDLHAVVRGCSTVTSTTSTTTATSSVFPLHHDPSCGFSSMFGGEQKPQILSLSTHPFEAKSSSIEELHELCKPFFSRSQPISLQTSPLFSSFSYSSASPKLAQTQDRQQQQQHRSKQPHQGGSSVTNQRSKRRKNQLKKVCQVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTSEHNHPAPTHKNSLAGSTRQKPLTPPQAETNKEDQSEKEDLTKPSSPATSGGEEEVQIQGEKSESREEKEDCFMEEDEEGDEFGSLDDVVLTDDFFENLDELNQLAGGSGDCFLDPFSSAIAIPNWVANSAAATAAGGS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3636 344 MobiDBLite consensus disorder prediction 103 133 - -
Tpr6g3636 344 MobiDBLite consensus disorder prediction 103 144 - -
Tpr6g3636 344 SUPERFAMILY WRKY DNA-binding domain 150 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g3636 344 MobiDBLite consensus disorder prediction 206 235 - -
Tpr6g3636 344 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 343 IPR044810 GO:0003700
Tpr6g3636 344 Pfam WRKY DNA -binding domain 154 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g3636 344 ProSiteProfiles WRKY domain profile. 147 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g3636 344 MobiDBLite consensus disorder prediction 275 291 - -
Tpr6g3636 344 Gene3D WRKY domain 136 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g3636 344 MobiDBLite consensus disorder prediction 206 291 - -
Tpr6g3636 344 SMART WRKY_cls 152 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g3636 344 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 3 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3636 Tpr-Chr6 39636773 39638680 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3636 2 342 WRKY Transcription Factor Family AT4G01250 45.906 3.46e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g3636 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3636 K13425 - gmx:100798084 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3636 6 39636773 39638680 Tpr1g0807 1 6746526 6748204 ECH
Tpr6g3636 6 39636773 39638680 Tpr6g3636 6 39636773 39638680 ECH
Tpr5g1357 5 26425817 26427879 Tpr6g3636 6 39636773 39638680 ECH
Tpr3g0607 3 5958344 5960088 Tpr6g3636 6 39636773 39638680 ECH
Tpr6g3636 6 39636773 39638680 Tpr5g1357 5 26425817 26427879 PCT