Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3628 ATGTTGTGTTGCGGAGGCGCGGAAGAAGATACCAGCGGGCCACCTGCAAACCAATACACTGCACCATCAAGAGGGGGTAACTCATATGGCGGTGGCGGAGATAGAGGAGAACCAAGGAGCAATATTGCCAAGACTGGTGGTCCACAAAAAGTATTACCAATTGAGATACCCTCTATATCATTGGATGAGTTAAATAGGTTAACGGGTAACTTTGGTACAAAGGCTTTCATTGGTGAAGGTTCCTATGGAAGGGTTTACTATGCAAAATTAAGTGATGATACTGAAGCTGCAATTAAAAAACTTGATACCAGTTCTGGTTCTGAACCTGAAAACGACGATTTCGCCGCCCAGTTATCAGTTGTTTCAAGACTCAAGCATGACAATTTTGTGGAGTTGATTGGATATTGTCTAGAAGCAGACAACAAAATTTTGGTTTATCAATATGCAAGTTTGGGTTCTTTGCATGATGTATTACATGGAAGAAAAGGTGTACAAGGTGCTGAACCTGGTCCAGTTTTAAGCTGGAATCAGAGAGCAAAAATTGCATTTGGTGCAGCAAAAGGGCTAGAGTTTCTTCATGAAAAGGTTCAACCTTCTATTGTTCATCGCGATGTTCGATCCAGCAATGTCTTGCTGTTTAATGACTATGAGGCCAAGATTGCTGATTTCAGCTTGACAAATCAGTCTTCTGACACCGCAGCTCGTCTACATTCGACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACCGGACAGATAACACAAAAAAGTGATGTTTATAGTTTTGGAGTTGTGCTTTTAGAACTCTTGACCGGAAGAAAGCCGGTAGACCACACAATGCCTAAAGGGCAACAAAGTCTTGTGACATGGGCAACTCCAAGGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGAATACCCTCCAAAGGCAATTGCTAAGTTGGCAGCTGTTGCAGCACTGTGTGTTCAGTATGAAGCTGATTTCCGGCCAAACATGACAATTGTTGTTAAAGCTCTCCAGCCACTTCTCAATGCAAAACCGGCTGGTCCTGAATCTAATGCTTGA 1098 0.4281 MLCCGGAEEDTSGPPANQYTAPSRGGNSYGGGGDRGEPRSNIAKTGGPQKVLPIEIPSISLDELNRLTGNFGTKAFIGEGSYGRVYYAKLSDDTEAAIKKLDTSSGSEPENDDFAAQLSVVSRLKHDNFVELIGYCLEADNKILVYQYASLGSLHDVLHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPESNA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3628 365 MobiDBLite consensus disorder prediction 1 47 - -
Tpr6g3628 365 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 364 - -
Tpr6g3628 365 Gene3D Transferase(Phosphotransferase) domain 1 150 361 - -
Tpr6g3628 365 Pfam Protein tyrosine and serine/threonine kinase 75 350 IPR001245 GO:0004672|GO:0006468
Tpr6g3628 365 SUPERFAMILY Protein kinase-like (PK-like) 51 350 IPR011009 -
Tpr6g3628 365 SMART tyrkin_6 71 350 IPR020635 GO:0004713|GO:0006468
Tpr6g3628 365 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Tpr6g3628 365 PANTHER OS03G0226300 PROTEIN 1 364 - -
Tpr6g3628 365 Gene3D Phosphorylase Kinase; domain 1 40 148 - -
Tpr6g3628 365 ProSiteProfiles Protein kinase domain profile. 71 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3628 365 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3628 Tpr-Chr6 39501509 39505310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3628 35 357 Receptor kinase-like Gene Family AT3G58690 43.731 3.54e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Tpr6g3628 PK_Tyr_Ser-Thr 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3628 - - gmx:100812507 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3628 6 39501509 39505310 Tpr6g3628 6 39501509 39505310 ECH