Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3624 ATGATGATGTCTTCATCAGGTGGTGGTGCATTCAGGCTTCGTTGGGATGTGTTTTTAAGTTTCAGAGGAGAAGATACACGTCACTGTTTCACAAAAAAACTGTACGAATCTCTTCACCGTGAAGGAATTCGTGCTTTCATGGACGACGAGGGTTTGGATCGTGGTGATCACATACAAACAAGTTTGCTTCAAGCCATTGATGACTCTGCTGCTTCCATTGTTATTATTTCTCCTAACTATGCTGATTCTCATTGGTGTCTTGATGAACTCGCCAGGATTTGTGATTCTGGGAGGCTTGTTATTCCTGTTTTCTATAAGGTTGATCCTTCTCATGTTAGGAAACAGTTGGGTCCTTTTAAAAATGGTTTTGATTATCTTGAAGACAGATTTCAAGATCAGAAAGATAAGGTTTTCAAGTGGAGAGATTCTATGCTTAAACTTGGTGGATTTGCTGGCTTCGTTGTAAAAACTACTAATAGTGATGATGGCGAACATAAGAATCTGATACGGCGATTGGTACAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTGTCTGAGTTTGCAGTGGGGATCAACAAACGTGTTGACAAGGTGATGGATTTATTACAAGTTCGATCCAACGGTGTCAAGGTTTTGGGGTTGTATGGGATGGGTGGTGTTGGTAAGACAACCCTAGCCAAGGCTCTTTTCAATAGTCTCGTTGGTCGTTTCGAGCGTAGATGCTTCATTTCCAATGTGAGACAATTTTCTTCTAAAGAAGATGGTTTGGTTTCTCTTCAAAGCAATGTCATTAAAGATCTTTCTTCTGAAGAAGGTGCTCGGAGTTTTACCGGTGATGTCAATGCTGGTATATCTGTTATCAAAAGAATAGTTCGTGAAAATCGAGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAATCAGCTTGATGCTTTGATTGGTAAAAGGGAGTGGTTTTATGAAGGAAGCTGCATAATAATTACAGCAAGGGATACAACTGTTTTGCCTGAAAAACATGTCAATAAGTTGTATGAAGTTACAGAATTGGATACCGAAGAAGCTCTGGAGTTATTCAGTCACCATGCACTAAGGAAAAAGGAACCTCCACAAAATTTTTTGGATTTTTCAAATAAAATTGTGTCTCTTACAGGAAGAATGCCATTGGCTTTGGAAGTTTTTGGTTGCTTGCTGTTTGGTAAGAGGAAGGTGGAGGAATGGGAGGATGCTGTTGAGAAGCTGAAAACAATTCGGCCTGGGAGTCTTCATGATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAAAAGTGTATATTCCTTGATATTGCTTGTTTCTTTGTTCAAATGGGAACGAAGCGCGATGATGTGATTGATATATTTAGAGGTTGTGGTTTTAGTGGAGAGATAGCTATGACAACCCTTGTAGAGAAATGCTTAATCAAAATAAGACAGGACGACAATACTTTGTGGATGCATGATCAGATTAGAGATATGGGAAGACAGATTGTTCTTAATGAAAACCATGTCGATCCTGGGATGCGTAGTAGATTGTGGGATCGTGCTGAAATCATGTCTGTTTTGAAGAGTAAGAAGGGAACAAGATGCGTACAAGGAATTGTACTGGACTTTAAGGAAGGACCGAGTTATCCTCATCAACATCAAGCAGAGAAATATAACAAAGTTATACTTGATACAAAATCCTTTGAACCAATGGTTAGCTTGAGATTGCTTCAGATCAATAATTTGAGTTTGGAAGGCAAGTTTCTTCCAGATGAACTGAAGTGGCTTCAATGGCGAGGATGTCCTTTAGAAGGCATACCTTTGGATACTTTGCCACGTGAACTGGCTGTCCTCGATCTCTCAAATGGCTGGAAAATTAAAAGCTTGCCGGGATTGGAAAGACACAAGCAGGTACCAGAGAACCTAATGGTTATGAACCTCTCCGACTGCTACCAACTTGCAGCAATCCCTGATTTATCTTGGTGTCTCAGGCTAGAGAAAATTAATTTGGAGAGCTGCATTAATCTAAAAAGGATTCATGAATCAATTGGCAGTTTAACTACCTTGCGTAATTTGAATTTGACGCGTTGTGAAAAGCTTATTGAACTTCCTAGCGATGTCTCTGGACTGAAACATTTGGAGAGCCTCCTTCTTTCTAGGTGCTACAAGTTGAAAGCATTACCAGAAAACATAGGCATTCTTAAATCTCTGAAAACACTTTTTGCGGATGACACTGCTATAGTAGAGTTGCCAGAGTCCACTTTCCGCCTGACCAAACTCGAACGACTTGTTTTGAATCGTTGCTCGTATTTGATAAGACTACCAAACGACATTGGAAAACTATGTTCTTTGCAAGAATTATCTCTTAATGAATCAGGTTTACAAGAATTACCCAACACTGTTGGATCCTTGAAAAATCTTGAGAAATTAAGTTTGATTTTGTGTAAATCTCTCACTCGAATGCCTGATTCTATAGGAAATCTTGAATCGTTGACAGAACTTTTGGCTTACAACAGTGGAATTAAAGAACTTCCTTCCACCATTGGTTCTTTATCCTATCTGAGGACGTTATCGGTCGGAAAGTGTGAACTTCTCAGTAAATTGCCCTACTCATTTAAAACTATGGCCTCAATTACTGAACTTGATTTAGATGGAACCTCTATCAGATATCTTCCAGATGAAATTGGAGAAATGAAACAACTGAGGAAACTTGAGATTGGGAATTGTAGTAATCTTGAATCATTACCAGAATCCATTGGCCACCTAGCATCTCTTACTACATTGAACATAATCAATGGAAATATAAGAGAATTGCCAGCGTCGATTGGATTACTAGACAATCTTGTTAACTTAACATTGAACAAATGTAGAATGCTTAAACAGCTTCCAGCTTCTATAGGAAACTTGAAATCTCTTTGTCACTTAAAGATGGAGGAAACAGCTATGAAAGACTTGCCTGAAAGTTTCGGTATGCTCTCAAGCTTGAGAACACTGAGAATGGCAAAGAGGCCTCATTTAGTTCCCATATCAGTGGAGAACACTGGCTCTTTTGTGCTACCATCTTCTTTTTGTAATCTGACCTTGCTATATGAGTTGGATGCTCGTGCCTGGAGACTATCTGGGAAAGTTCCAGATGATTTTGAGAAGCTATCCTTATTAGAGACTTTAAATTTGGGCCAAAACAATTTTCACAGCCTTCCTTCCAGTTTGGAAGGTCTTTCTTTTCTCAAGAAGCTCTCACTGCCAAATTGCACAGAGCTGATTTCTCTCCCTTCACTTCCTTCAAGCTTAATCGAGCTAAACGCTGATAATTGTTATGCCTTAGAAACTATACATGACATGTCAAATTTAGAGAGTTTGGAGGAGCTGAAACTCACAAATTGTGACAAAGTGGTAGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAAAAGATTGTACTTGAGTGGTTGCAATGCATGCTCCTCTAAAGTATGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGCATGCCAGGAACCAAGTTACCTGAATGGTTTTCAGCAGGAACTGTAAGCTTTTCGAAGCGCAAAAATCTCGATTTAACAAGTGTAGTTGTAGGTGCTATTGTTTCAATTAACCACAACATTGACATGCCTATAAAGAGAGAAGAAATGCCTTGTATCATTGATGTTGAAGCAAATGTTTTCAAACTCGGGAAACGAATATTTAATAGAACTTTAAACATACATGGGATGCCAAGGACAAATGTAGATCACATACACTTGTGTAGGTTCCAGAATTACGATCAACTGGTAGCCTTTTTAAAAGATGCCGATACATTTTGTGTGACCACGAGAAGTCCTCCTTTTGATAAAGGATTGAAGTTGAAGAAATGCGGAGTTCATTTAATCTTTGAAGGGGATGATGATTATGAGGGAGAAGAAGAATCGTTAGACATACGCCTACAATCTGTCTCGGAAAGGCTGACCAGGTTTTTTAACACTTGTGATGAAGGTGTTGATGATACTGAGAGTGAAGATGATCGGTGTCAACATGAATTGGAGCAAGAAAAAGAAGAGACTGGAACTAGATTACTTGGTTTAAATTTTAAAGGTAGTTCCATTATTTCCTTCCTGCTTAGTCTATTCTTTGTGCTGTTGGGTTGGTTTTGGTTTAAGTTTATGTCTAGTGCTGTAAAAAGAGATTGA 4215 0.3881 MMMSSSGGGAFRLRWDVFLSFRGEDTRHCFTKKLYESLHREGIRAFMDDEGLDRGDHIQTSLLQAIDDSAASIVIISPNYADSHWCLDELARICDSGRLVIPVFYKVDPSHVRKQLGPFKNGFDYLEDRFQDQKDKVFKWRDSMLKLGGFAGFVVKTTNSDDGEHKNLIRRLVQRVLKELSNTPMVVSEFAVGINKRVDKVMDLLQVRSNGVKVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFISNVRQFSSKEDGLVSLQSNVIKDLSSEEGARSFTGDVNAGISVIKRIVRENRVLLVLDDVDNVNQLDALIGKREWFYEGSCIIITARDTTVLPEKHVNKLYEVTELDTEEALELFSHHALRKKEPPQNFLDFSNKIVSLTGRMPLALEVFGCLLFGKRKVEEWEDAVEKLKTIRPGSLHDVLKISYDGLDEQEKCIFLDIACFFVQMGTKRDDVIDIFRGCGFSGEIAMTTLVEKCLIKIRQDDNTLWMHDQIRDMGRQIVLNENHVDPGMRSRLWDRAEIMSVLKSKKGTRCVQGIVLDFKEGPSYPHQHQAEKYNKVILDTKSFEPMVSLRLLQINNLSLEGKFLPDELKWLQWRGCPLEGIPLDTLPRELAVLDLSNGWKIKSLPGLERHKQVPENLMVMNLSDCYQLAAIPDLSWCLRLEKINLESCINLKRIHESIGSLTTLRNLNLTRCEKLIELPSDVSGLKHLESLLLSRCYKLKALPENIGILKSLKTLFADDTAIVELPESTFRLTKLERLVLNRCSYLIRLPNDIGKLCSLQELSLNESGLQELPNTVGSLKNLEKLSLILCKSLTRMPDSIGNLESLTELLAYNSGIKELPSTIGSLSYLRTLSVGKCELLSKLPYSFKTMASITELDLDGTSIRYLPDEIGEMKQLRKLEIGNCSNLESLPESIGHLASLTTLNIINGNIRELPASIGLLDNLVNLTLNKCRMLKQLPASIGNLKSLCHLKMEETAMKDLPESFGMLSSLRTLRMAKRPHLVPISVENTGSFVLPSSFCNLTLLYELDARAWRLSGKVPDDFEKLSLLETLNLGQNNFHSLPSSLEGLSFLKKLSLPNCTELISLPSLPSSLIELNADNCYALETIHDMSNLESLEELKLTNCDKVVDIPGLECLKSLKRLYLSGCNACSSKVCKRLSKVALRNFQNLSMPGTKLPEWFSAGTVSFSKRKNLDLTSVVVGAIVSINHNIDMPIKREEMPCIIDVEANVFKLGKRIFNRTLNIHGMPRTNVDHIHLCRFQNYDQLVAFLKDADTFCVTTRSPPFDKGLKLKKCGVHLIFEGDDDYEGEEESLDIRLQSVSERLTRFFNTCDEGVDDTESEDDRCQHELEQEKEETGTRLLGLNFKGSSIISFLLSLFFVLLGWFWFKFMSSAVKRD* 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3624 1404 Gene3D Ribonuclease Inhibitor 563 774 IPR032675 -
Tpr6g3624 1404 SUPERFAMILY RNI-like 730 1115 - -
Tpr6g3624 1404 PANTHER TMV RESISTANCE PROTEIN N-LIKE 12 1296 - -
Tpr6g3624 1404 Gene3D - 351 436 IPR042197 -
Tpr6g3624 1404 PRINTS Disease resistance protein signature 214 229 - -
Tpr6g3624 1404 PRINTS Disease resistance protein signature 293 307 - -
Tpr6g3624 1404 PRINTS Disease resistance protein signature 386 400 - -
Tpr6g3624 1404 PRINTS Disease resistance protein signature 900 916 - -
Tpr6g3624 1404 SMART LRR_typ_2 926 949 IPR003591 -
Tpr6g3624 1404 SMART LRR_typ_2 785 808 IPR003591 -
Tpr6g3624 1404 SMART LRR_typ_2 832 855 IPR003591 -
Tpr6g3624 1404 SMART LRR_typ_2 879 902 IPR003591 -
Tpr6g3624 1404 SMART LRR_typ_2 1054 1077 IPR003591 -
Tpr6g3624 1404 SMART LRR_typ_2 738 761 IPR003591 -
Tpr6g3624 1404 Gene3D - 179 346 IPR027417 -
Tpr6g3624 1404 SUPERFAMILY "Winged helix" DNA-binding domain 424 532 IPR036390 -
Tpr6g3624 1404 Gene3D Ribonuclease Inhibitor 775 1006 IPR032675 -
Tpr6g3624 1404 Coils Coil 1342 1362 - -
Tpr6g3624 1404 Pfam NB-ARC domain 196 422 IPR002182 GO:0043531
Tpr6g3624 1404 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 151 IPR035897 -
Tpr6g3624 1404 Pfam TIR domain 15 183 IPR000157 GO:0007165
Tpr6g3624 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 446 IPR027417 -
Tpr6g3624 1404 Gene3D - 13 178 IPR035897 -
Tpr6g3624 1404 Gene3D Ribonuclease Inhibitor 1007 1207 IPR032675 -
Tpr6g3624 1404 SMART till_3 14 150 IPR000157 GO:0007165
Tpr6g3624 1404 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1296 IPR044974 GO:0006952
Tpr6g3624 1404 SUPERFAMILY L domain-like 558 819 - -
Tpr6g3624 1404 ProSiteProfiles TIR domain profile. 13 177 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3624 Tpr-Chr6 39435333 39442611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3624 15 861 WRKY Transcription Factor Family AT4G12020 29.378 1.72e-74 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3624 - - mtr:MTR_8g062130 2280.37