Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3620 ATGGCTTCGTTTCTAAATAATCTTTTCAGCTCCCCTTACAAAAAGTATAATTTCAAAGATGAGCAGTTTAATAAAGACCCTCTGGCGTGGTCGAGACCACTAGTTAGGCATCACTGTGGCGAATTCTCCATGGCTGCAATTCAGGCGAATACGGATATGGAAGATGAGAGCCAAGTTGAAGTTGGCACTGATGCACTCTTTGTTGGAGTTTATGATGGACATAAAGGGATGATTCAGCAGAATAATAACTCTATGAATGAGATTATTCTGAGGCAAGTTGTTGACCAAATGGAGACAGATTTTAATGAGTTTGCTAGAAATAGTTTTGAGCAACATCATGAGGTACAGAATAGTTTTGTTAGTTCAGGTTGTTTGATTTGTATCATATGGAAAGGGACGTTATTTGTCGCCAACGTTGGAGACTCGCGCGCTATACTCGGTTCTCAGAAGGGCATTGGTAAAAGATTGGTTGTTAAACAGATGGTTAGAGATCACAGTTTTCTAAATCCAAATATTAAACAAGAATTCACTGAATTGCATCCAGATTATAATAATCGTAGTCGCTACCAAAGCATTGAAGTTAAAGGCTTAATCGAGACTAGTAGATGTATAGGATATGCATATATGAAAAATGCACAGTTCACCAAAAGGAGATCATTCGAAATCCCATTGTCTGAAGTAGTGACTCCAACTTTTACAAGACCTTTGCTATCATCACAGCCAGATGTTTATTCAACAGTCCTAAGAGACAGTGATAGATTCATTATATTTGGATCTGGTGGATTTTGGAAATTGATTTCAAATGAGAAGGCTGCTAGAGTTGTTAACACCAGTCCACGAGATAGAATCGCTGAAAGACTTGTCACGCTTGCTCTAGAGAAGGGGGCTGCTAAAAGGGGGAAAAAATATCGTGACCTTATAGAGATTCCTAAGAGTAATTGTATTAGTGGGAACAATGGCAATCGAAATTATGGATTTAGATCGGCTTATCATGATGATATAACTGTGATTGTTGTATATCTGGACCAAAGGCTAAATAGGGAGGGTGTGACGCCAGAGATCAACTCCTATACAGGCTACGATTACGCAGTTCAACAATCAGAATTTACAAATTTCTATAATAATGCTAATGCGTGA 1137 0.3835 MASFLNNLFSSPYKKYNFKDEQFNKDPLAWSRPLVRHHCGEFSMAAIQANTDMEDESQVEVGTDALFVGVYDGHKGMIQQNNNSMNEIILRQVVDQMETDFNEFARNSFEQHHEVQNSFVSSGCLICIIWKGTLFVANVGDSRAILGSQKGIGKRLVVKQMVRDHSFLNPNIKQEFTELHPDYNNRSRYQSIEVKGLIETSRCIGYAYMKNAQFTKRRSFEIPLSEVVTPTFTRPLLSSQPDVYSTVLRDSDRFIIFGSGGFWKLISNEKAARVVNTSPRDRIAERLVTLALEKGAAKRGKKYRDLIEIPKSNCISGNNGNRNYGFRSAYHDDITVIVVYLDQRLNREGVTPEINSYTGYDYAVQQSEFTNFYNNANA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3620 378 Pfam Protein phosphatase 2C 66 298 IPR001932 -
Tpr6g3620 378 SMART PP2C_4 35 339 IPR001932 -
Tpr6g3620 378 PANTHER ALPHABET, ISOFORM E-RELATED 19 345 - -
Tpr6g3620 378 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 19 345 - -
Tpr6g3620 378 ProSiteProfiles PPM-type phosphatase domain profile. 41 341 IPR001932 -
Tpr6g3620 378 SUPERFAMILY PP2C-like 26 342 IPR036457 -
Tpr6g3620 378 CDD PP2Cc 53 341 IPR001932 -
Tpr6g3620 378 Gene3D - 21 349 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3620 Tpr-Chr6 39378082 39379633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3620 28 374 PP2C-type Phosphatase Gene Family AT5G06750 37.197 1.47e-71 227