Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3612 ATGACTGGAACTAATCAAGTCAACCTCAGTGAATCTAGGAGTGTTGTTCCATTGAATACATATGTATTAATCTCAAATTTCAAGCTTGCATACAATCTTCTAAGACGTGCTGATGGAACATTCAACAGAGATTTAGCAGAGTTTCTTGACAGAAAGGTACCGGCAAACGCGGTTCCCGTCGACAGAGTCTTTTCGTTCGATCATGTCAATAGAAACTCTGGTCTTTTCAATCGAGTTTACTTACCGTCTTCAGAAAATGAACCACAATGGGGTGTCAAAGATTTAGAGAAACCATTGAGTACAACAGAAATTGTTCCTGTCATAGTATTCTTCCATGGTGGAAGCTTCTCACATTCCTCAGCTAACAGTGCTATCTATGACACATTTTGTAGAAGACTAGTAAGCGTTTGTAAAGCTGCTGTTGTTTCGGTTAATTACCGAAGATCGCCGGAGCATCGGTTTCCATGTGCTTATGAAGATGGTTGGAATGCACTCAAATGGGTGAAGTCAAGAAAATGGCTTCAAAGTGGGAAGGAAAAGAAAGTTTATATTTACATGGCTGGTGATAGTTCTGGTGGAAACATTGTTCATCATGTAGCAGTGAAAGCTTCTGAAGAAAAAGAAGAAGGAATTGAGGTCTTAGGGAACATTCTTCTTCATCCACTGTTTGGTGGTGAGAAAAGAACAGATTCTGAAATGAGATTAGATGGAAAGTACTTTGTTAGATTGCAAGATCGTGATTGGTATTGGAGAGCTTTTTTACCGGAAGGTGAAGATAGAGACCACCCTGCTTGTAATCCGTTTGGTCCTAAAGGGGAAAAAAATCTTAAAGGACTTGATAAGTTTCCTAAAAGTCTTGTTTGTGTTGCTGGTTTGGATCTTCTACAAGATTGGCAATTAGCTTATGTGGATGGTTTGAGGAATTTTGGTCAACAAGTTAAACTTCTTTTCCTTAAGGAGGCTACTATTGGCTTTTACTTCTTGCCTAATAATGATCATTTCTATTGCCTTATGGAGGAAATCAAGAACTTTGTTAATCCTAACTGTTAA 1050 0.3848 MTGTNQVNLSESRSVVPLNTYVLISNFKLAYNLLRRADGTFNRDLAEFLDRKVPANAVPVDRVFSFDHVNRNSGLFNRVYLPSSENEPQWGVKDLEKPLSTTEIVPVIVFFHGGSFSHSSANSAIYDTFCRRLVSVCKAAVVSVNYRRSPEHRFPCAYEDGWNALKWVKSRKWLQSGKEKKVYIYMAGDSSGGNIVHHVAVKASEEKEEGIEVLGNILLHPLFGGEKRTDSEMRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGEKNLKGLDKFPKSLVCVAGLDLLQDWQLAYVDGLRNFGQQVKLLFLKEATIGFYFLPNNDHFYCLMEEIKNFVNPNC* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3612 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Tpr6g3612 349 Gene3D alpha/beta hydrolase 1 346 IPR029058 -
Tpr6g3612 349 PANTHER ARYLACETAMIDE DEACETYLASE 2 346 - -
Tpr6g3612 349 SUPERFAMILY alpha/beta-Hydrolases 65 346 IPR029058 -
Tpr6g3612 349 Pfam alpha/beta hydrolase fold 108 326 IPR013094 GO:0016787
Tpr6g3612 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Tpr6g3612 349 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 2 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3612 Tpr-Chr6 39275021 39277345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3612 1 346 Carbohydrate Esterase AT3G63010 72.046 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3612 K14493 - gmx:100788435 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3612 6 39275021 39277345 Tpr6g3612 6 39275021 39277345 ECH
Tpr6g3612 6 39275021 39277345 Tpr1g1496 1 13748626 13751276 ECH
Tpr6g3612 6 39275021 39277345 Tpr1g1255 1 11215208 11218002 PCT