Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3608 ATGTCATTTCTCTCCTATCTCCTTCCTCTCCTTTTCCTTCTCCTCAATTTCCCCTCCTTTTCCATCTCCGCCACAACAGCATGTCCTCTAAACATAACCATCCTCCGCCACATCGGCGACGGAACACTCCCACCAATCGACCCTGGAAAACAGTGCCATTACATCACACAAGCAATCAATCTAGTCCAATCCGATTACCTCCACCGCACCGGCCTCTTCGTTCCACCTCCCAACACCGCCGAATCATGCTGGACTTCATTCCAATCATTCATAAACGAATTTCAACCTAATTTCGATATTCGTCGTTCTTGCGGTTTTCAAACTTCATGGATCTCACAAGGTTGCATGAACATCACAACAAAACAACAATTCGAAAATCAAGTCTCTTTACCTCAACTTCAATCTCTTCAATTAAACTGTAACACTTCTCTTGATAACAATACTCCTTGTGCTCTTTGCACATCCAAACGCTCAGAAGCACTTTCATCTCTCACCGGAGCAACTCCCGGTACCGTCGCTGATTGTAGATCTTATACCGCGATTTACTCCGCTTCACTTTCTGTTGAGTTTGGTCCAACTAACACCGGTACTGCTAAGTGTTTGTTCGGTCTTGATTTCACTCCGGATTCTTCGGGTTCTAGCAGTAAGCATAAAACTACTGTTATTGTTCTTGTAACGGTTTTTCTATTTTTAGGATTGTTATTGTTTTGTGGAATTTGGATTTTTCTTAAACGGAGAAAAATTGCCAAAGAGAAAGGTAAGAATGGTAGAACTGAGATTGTTATAGGTTTGAATTCGGGTTTGGATTCGATGAATCAAAGTACTACTTTGATTAGGTTTAGTTTTGATGAGATTAAGAAAGCAACTAGGAATTTTTCTAGGGATAATATAATTGGAAGTGGTGGTTATGGAAATGTTTATAAAGGTTTGTTATCTGATGGAACAGAAGTTGCATTGAAAAGGTTTAAGAATTGTTCTGTTGCTGGTGATGAAAGTTTTACTCATGAAGTTCAAGTTATTGCTAGTGTTAGACATGTTAATCTTGTTGCTTTAAGAGGTTATTGTACTGCTACTACTAATTTAGAAGGTCATCAGAGGATTATTGTTACTGATTTGATGGAGAATGGGAGTCTTTATGATCATTTATTTGGTTCGTCGAAGAAGAAATTGAGTTGGCCGATGCGTCAGAAGATTGCTCTTGGTACGGCTAGGGGTTTAGCTTATTTGCATTATGGTGCTCAACCGTCGATCATTCATAGGGATATTAAAGCGAGTAATATACTCTTGGATGAGAAGTTTGAGGCTAAGGTAGCGGATTTTGGATTGGCGAAGTTTAATCCGGAGGGAATGACTCATATGAGTACTAGGGTAGCTGGAACTATGGGGTATGTTGCTCCTGAGTATGCTTTGTATGGACAGTTGACAGAGAGGAGTGATGTGTTTAGTTTCGGTGTTTTGCTTCTCGAGCTTTTGAGCGGAAGAAAGGCGCTTGAAACGAATGAGGATGGTCAACCCTCTGCTTTTAGTGACTTGGCTTGGTCATTGGTTAGAAATAATAGGGCTTTGGATGTTGTTGAAGATGGTATGCCAGAACCTGGTACACCAGAAATTCTCGAGAAATATGTGTTGGTTGCTGTTTTATGTTCTCATCCACAGCTATATGCGAGGCCAACAATGGATCAGGTTGTTAAAATGCTGGAAACAGATGATGAAGCATTGCCCTCGGTAGTCGAAAGGCCAATCCCTTTTATTTCAGGGAGACTTGATATTGAGAAATCTGCGAGCAATAACTCGGGTCAGCTCTGCAGTCCCACTGGTTATCAAGCATATACATTGCAACAAAGTCGTCGCGCTTCTACTTGTAACGAAGAGGAAGGAAACTCAAAACGTCCTTCTAATTTTAAGGAAGAGGAAGGAAACTCGGAACGCGGGTCTGTAAGCAAAGATTGA 1950 0.4108 MSFLSYLLPLLFLLLNFPSFSISATTACPLNITILRHIGDGTLPPIDPGKQCHYITQAINLVQSDYLHRTGLFVPPPNTAESCWTSFQSFINEFQPNFDIRRSCGFQTSWISQGCMNITTKQQFENQVSLPQLQSLQLNCNTSLDNNTPCALCTSKRSEALSSLTGATPGTVADCRSYTAIYSASLSVEFGPTNTGTAKCLFGLDFTPDSSGSSSKHKTTVIVLVTVFLFLGLLLFCGIWIFLKRRKIAKEKGKNGRTEIVIGLNSGLDSMNQSTTLIRFSFDEIKKATRNFSRDNIIGSGGYGNVYKGLLSDGTEVALKRFKNCSVAGDESFTHEVQVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSSKKKLSWPMRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVLLLELLSGRKALETNEDGQPSAFSDLAWSLVRNNRALDVVEDGMPEPGTPEILEKYVLVAVLCSHPQLYARPTMDQVVKMLETDDEALPSVVERPIPFISGRLDIEKSASNNSGQLCSPTGYQAYTLQQSRRASTCNEEEGNSKRPSNFKEEEGNSERGSVSKD* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3608 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Tpr6g3608 649 MobiDBLite consensus disorder prediction 613 649 - -
Tpr6g3608 649 SMART serkin_6 292 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3608 649 Pfam Protein tyrosine and serine/threonine kinase 295 566 IPR001245 GO:0004672|GO:0006468
Tpr6g3608 649 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 16 620 - -
Tpr6g3608 649 Pfam SPARK 24 167 IPR043891 -
Tpr6g3608 649 CDD STKc_IRAK 298 567 - -
Tpr6g3608 649 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Tpr6g3608 649 SUPERFAMILY Protein kinase-like (PK-like) 268 567 IPR011009 -
Tpr6g3608 649 ProSiteProfiles Protein kinase domain profile. 292 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3608 649 Gene3D Phosphorylase Kinase; domain 1 263 371 - -
Tpr6g3608 649 Gene3D Transferase(Phosphotransferase) domain 1 373 576 - -
Tpr6g3608 649 MobiDBLite consensus disorder prediction 622 649 - -
Tpr6g3608 649 PANTHER OS01G0253100 PROTEIN 16 620 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3608 Tpr-Chr6 39142371 39145069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3608 1 612 Receptor kinase-like Gene Family AT2G48010 60.000 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Tpr6g3608 PK_Tyr_Ser-Thr 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3608 - - gmx:100819453 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3608 6 39142371 39145069 Tpr6g3608 6 39142371 39145069 ECH
Tpr6g3608 6 39142371 39145069 Tpr1g1248 1 11154982 11157572 ECH