Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr6g3602 | ATGGGGTTTAGGGTTTTAATGAGTTTATGGGTGAGTGAGAACGGTTCGAAGAAGGTCCTTGGGATTGAACGAAGGGTACTTAAGGCAGTTGCTATTATTAAGATGTCAGAACAACAGCCCGCTATCCGAGTGCAATCGGCAAATATTGAAGGTAAAATGGATGACGACTTCTCAGATTTGTGTGTGATATGCATTGCTCAGAAATACAATGTTGCTTTTGTCCCGTGCGGGCATATGTGTTGCTGTACAACTTGTTCTCGACCCTTAAAAATGTGCCCTCTTTGCCGCGGACAGATAAAGCAAGTTATACGAATTTTCTATCCCTAA | 327 | 0.4251 | MGFRVLMSLWVSENGSKKVLGIERRVLKAVAIIKMSEQQPAIRVQSANIEGKMDDDFSDLCVICIAQKYNVAFVPCGHMCCCTTCSRPLKMCPLCRGQIKQVIRIFYP* | 109 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr6g3602 | 108 | Pfam | Zinc finger, C3HC4 type (RING finger) | 59 | 102 | - | - | |
Tpr6g3602 | 108 | ProSiteProfiles | Zinc finger RING-type profile. | 61 | 96 | IPR001841 | - | |
Tpr6g3602 | 108 | PANTHER | CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING | 54 | 106 | - | - | |
Tpr6g3602 | 108 | SUPERFAMILY | RING/U-box | 59 | 103 | - | - | |
Tpr6g3602 | 108 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 43 | 107 | IPR013083 | - | |
Tpr6g3602 | 108 | PANTHER | OS06G0252500 PROTEIN | 54 | 106 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr6g3602 | Tpr-Chr6 | 39094074 | 39095295 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr6g3602 | 61 | 105 | C3H Transcription Factor Family | AT3G06140 | 36.735 | 1.21e-09 | 52.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr6g3602 | K15688 | - | tcc:18613412 | 92.4337 |