Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3585 ATGAAGGTTCAATATGCTGCTCATCTTCCGCTCGTATTGCATGCATGGCCTGACACTTGCACATTTCACGGAGGATTGAAAACTGGCATTGTTGGTAGAACAGGTAGCGGCAAATCAACTCTTATACAAACACTTTTCCAACTCGTTGAACCTACTGCCGGGAAAGTTATCATTGACAACATCAACATCTCTACAATCAGACTGCATGATTTGAGGTCTCGACTAAGTATTATTCCGCAAGATCCAACAATGTTTGAGGGGACAGCATTGGATAAGTGTCATCTGGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCTTCAGTCAGTGAAAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTTTGTCTAGGTAGGGTTCTGCTTAAGAAGAGCAAGATTTTGGTGCTTGATGAAGCCACTGCTGCATCAGTTGATACAGCTACGGATAATTTGATTCAACAAACTCTTAGGCAGCATTTCACAGACTCTACTGTCATTACCATTGCACATCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTACTTCTTAGTAAGGACTTATTGAGGAGTATGACTCCCCAACCACATTGCTTGAGGGATAAGTCGTCATCTTTTGCTAAGCTTGTTGCAGAGTATACCATGAGGTCCAACTCAAAATTTTGA 678 0.4189 MKVQYAAHLPLVLHAWPDTCTFHGGLKTGIVGRTGSGKSTLIQTLFQLVEPTAGKVIIDNINISTIRLHDLRSRLSIIPQDPTMFEGTALDKCHLGDEVRKKEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATAASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSDMVLLLSKDLLRSMTPQPHCLRDKSSSFAKLVAEYTMRSNSKF* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3585 225 Gene3D - 3 92 IPR027417 -
Tpr6g3585 225 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 225 - -
Tpr6g3585 225 Pfam ABC transporter 21 145 IPR003439 GO:0005524
Tpr6g3585 225 SMART AAA_5 24 192 IPR003593 -
Tpr6g3585 225 Gene3D - 93 217 IPR027417 -
Tpr6g3585 225 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 215 IPR003439 GO:0005524
Tpr6g3585 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 195 IPR027417 -
Tpr6g3585 225 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 2 225 - -
Tpr6g3585 225 CDD ABCC_MRP_domain2 3 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3585 Tpr-Chr6 38954888 38956632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3585 24 224 Calmodulin-binding Proteins AT2G36910 27.876 6.14e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3585 - K05666 gmx:100811245 327.02