Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3526 ATGGTTAATGGTGATTATGCTTACCCTTCAACTATGAATGTTGAGAGTGTGCACCGTGTGGCAATACCACCACCACAACCATTTCTGAAGTCACTCAAATATTCTATGAAAGAAACATTTTTTCCAGATGACCCATTGAGAAAGTTCAAGAACCAATCAGCTTCAAGGAAATTTGTGCTTGCTCTTCAACATTTTTTGCCCATTTTGGAGTGGGCCCCAAAATACACAATTCAGTTCTTGAAATCTGATCTTATTGCTGGAATCACCATTGCTAGTTTAGCTATTCCTCAAGGGATTAGTTATGCTAAGCTTGCTAATCTTCCTCCAATTCTTGGACTTTATTCAAGCTTTATACCACCATTGATTTATGCGATGATGGGTAGCTCGAGGGATTTGGCCGTGGGAACTGTGGCGGTTGGATCACTTCTAATGGCTTCCATGTTGGGTCGTGAAGTTAATCCAAACGAGAATCCGAAGCTTTTTCTCCACCTTGCTTTCACAGCAACATTCTTTGCTGGAGCTCTACAATTATCACTCGGTCTCTTTAGGTTGGGGTTTATTGTGGATTTTCTATCACATGCAGCAATTGTAGGATTCATGGGAGGAGCAGCAACAGTGGTTTGTCTTCAACAACTAAAATCAATTTTAGGACTTGAACATTTTACACACAAAGCTGATATTGTGTCAGTTATGAGTTCTGTTTTCACACAAACTCGTGAGTGGAGGTGGGAAAGTGCAGTGTTGGGATGTTGCTTTATTTTTTTCCTCCTCGTCACAAGATACATCAGCAAACAACGACCAAAGTTGTTTTGGGTGTCAGCAATGGCGCCACTAACATCGGTTATATTGGGAAGTCTACTGGTTTATCTCACTCACGCTGAGAAGCACGGTGTTCAAGTGATAGGAGAATTGAAGAAGGGGCTTAATCCACCTTCAGCAACAGATTTGGTGTTTGTGTCACCATATATGGGCACAGCCATCAAAACTGGACTCATTATTGGTATAATAGCTCTTGCGGAAGGAATAGCAGTAGGAAGAAGCTTTGCAATGTTTAAAAATTACCATATTGATGGCAATAAAGAAATGATAGCTTTTGGTACCATGAATATGTTGGGTTCATTAACCTCTTGTTACCTCACAACAGGACCGTTTTCGCGTTCGGCCGTGAACTACAACGCCGGGTGCAAAACTGCAGCATCAAACATTGTAATGTCAATAGCAGTGATGTTGACATTATTATTCCTAACACCATTGTTCCATTACACTCCTCTTGTAGTTCTAGCAGCCATCATTGTATCTGCAATGCTTGGACTCATAGATTATCAAGCAGCAATTCATTTGTGGAAAATTGACAAATTTGATTTTTTAGTATGCTTCAGTGCATATATTGGGGTTGTCTTTGGCAGTGTTGAAATTGGCTTAGTAATAGCTGTTGCATTATCTGTGCTTAGAGTACTTTTATTTGTTGCAAGGCCTAGAACATTTGTTTTAGGAAACATTCCAAATTCTTCAGCATACAGAAATGTTGAACATTATCCAAATGCACATCATGTTCCTGGAATACTAATTCTTGAAATTGATGCACCAATTTACTTTGCTAATGCAAGCTATTTAAGAGAGAGGATCACAAGGTGGATTGATGAAGAGGAAGAGAGACTTGAAGGTGCGGGGAAAACCAGTTTGGAGTATGTTATTGTGGATATGACCGCTGTTGCAAACATAGATACGAGTGGAATAAGCATGCTCGAAGAGTTCAAAAAGTCGGTCGACAGAAAAGGGCTACAACTCGTTTTGGTCAACCCCGGAAGCGAGGTGACGAAGAAACTGAACAAATCAAAGTTCCTTGATGAAATAGGACACAAATGGCTTTATGTGACAGTTGAAGAAGCTGTTGGAGTATGCAGCTTCATGCTTGGTACACACAAGGCTAATCCAAAGAAAGATGAACCAGAAGGTTTGAACAGTGTGTGA 1971 0.4028 MVNGDYAYPSTMNVESVHRVAIPPPQPFLKSLKYSMKETFFPDDPLRKFKNQSASRKFVLALQHFLPILEWAPKYTIQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGREVNPNENPKLFLHLAFTATFFAGALQLSLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHKADIVSVMSSVFTQTREWRWESAVLGCCFIFFLLVTRYISKQRPKLFWVSAMAPLTSVILGSLLVYLTHAEKHGVQVIGELKKGLNPPSATDLVFVSPYMGTAIKTGLIIGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGTMNMLGSLTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLAAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFSAYIGVVFGSVEIGLVIAVALSVLRVLLFVARPRTFVLGNIPNSSAYRNVEHYPNAHHVPGILILEIDAPIYFANASYLRERITRWIDEEEERLEGAGKTSLEYVIVDMTAVANIDTSGISMLEEFKKSVDRKGLQLVLVNPGSEVTKKLNKSKFLDEIGHKWLYVTVEEAVGVCSFMLGTHKANPKKDEPEGLNSV* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3526 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Tpr6g3526 656 Pfam Sulfate permease family 80 460 IPR011547 GO:0016021
Tpr6g3526 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Tpr6g3526 656 PANTHER SULFATE TRANSPORTER 3 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr6g3526 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 3 654 - -
Tpr6g3526 656 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr6g3526 656 Pfam STAS domain 512 630 IPR002645 -
Tpr6g3526 656 Gene3D STAS domain 491 636 IPR036513 -
Tpr6g3526 656 SUPERFAMILY SpoIIaa-like 512 634 IPR036513 -
Tpr6g3526 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3526 Tpr-Chr6 38242632 38250516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3526 10 651 Inorganic Solute Cotransporters AT4G02700 67.652 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3526 K17471 - gmx:100804670 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3526 6 38242632 38250516 Tpr6g3526 6 38242632 38250516 ECH
Tpr6g3526 6 38242632 38250516 Tpr1g2037 1 20933293 20941753 PCT