Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3522 ATGAACCTTGAAACTGAGTTTCTTCAAAAACCCATTTTTCTTCACGGGTTATCTATTATACTTCATATACTATTGCTTTTAGCGATTTTAGTTTCATGGGTTTGGAAAAAAATCAAAACTTGTGCTGTAATCAATGAGTGCAATGAGACACCAAATAGCACTAGCAATTGGTTTAATGTCACAAAGTTTTGTTGTATTGCTTTTTCTTCTTTCAATTTTGTTTTGTTTCTTTTTGATTACTGGTATACAAGTGTTTGGTCAGAAGAAAATGTTGTTACCCTTTTTGATTTAGTTCTCAAAACAGTTACTTGGTGTGTGGTTTGTGTTTGTATCCACAAAGGGTTCTTCTTTTTGTTCAGTTCAGATCAAAGAAAAAGAAGGTTTCCATTGTTTTTTAGAGTTTGGTGTGTTTTTTATCTCTTTGTTTCTTGTTATTGGTTTGTGACTGACATTGTTGTTTTGTATGAAAATCATATTGAGTTAAGGGTTCAATGTATGGTTTCTGTTGTGGTTTCATTTTGTGTTAGTTTGTTGTTTTTTTATGTGGGGTATTGTGTGAAAAATGAAGGTGATAGAACTCTTCAAGAGCCTCTTTTGAATGGTAATTATGGTAATGCTTTAGAGTTAAGAGAGACTAAAGGGAGTGATACTGTTACTCCTTATTCAAATGCTGGAATTTTGAGCCTTCTTACCTTATCTTGGGTGGGTCCACTTATAGCATTTGGAAATAAGAAGACCCTAGACCTCGAGGATCTTCCTCAGCTAGATAGTCGAGATAGTGCTGCGGGAGCTTTTCCAATTTTCAGAGACAAAGTTGAAGCTGATTGTGGTGCAATCAATAGAGTAACCACACTTAAGTTGGTTAAGTTATTGATAATTTTAGGGTGGAAAGAGATTCTTATCACTGGTTTTCTTGCACTGATAAACACTTGTGCTTCTTATGTTGGTCCTTATCTTATTGATTCTTTTGTTCAATACCTTGGTGGAAAAAGGCTATATGAGAATCAAGGCTATGTCTTGGTTTCTGCTTTTATATTTTCACAGCTTGTGAAATGCTTATCACAAAAGCATTGGTACTTTAAGTTGAAGCAACACGGAGTTCGAATCCGAGCACTGCTTGTGACTATGATATATGAAAAAACCTTAACACTTTCTTGTCAATCAAGGCAGTGTCACACTTCTGGAGAAATTACCAATTTCATTACTGTTGATGTCGAAAGAGTTGGTTTTTTCACTTGGTACATGCATGATGGGTGGATAGTAGTTTTGGAAGTTACGTTGGCATTGTTGATTTTGTATAAAAACGTTGGACTTGCTTCCATTGCTTCTCTTGTTACAACCATAATTGTTATGTTGGCAAATGTTCCGTTGGGATCATTGCAAGGGAAGTTTCAAAAGAAGTTGATGGATTCAAAGGATACTAGAATGAAGAGCACGTCTGAAACTTTAAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAAATAATTGAGCTCAGGGATGCGGAACAAGGCTGGTTGAAAAAATCTCTTTATACTTCAGCTATGACTCAATTTTTCTATTATGGTGCATCTACAGTTATATCTGTGGTTACTTTTGGTACTTGTATGCTCATAGGGATCCCACTTGAATCAGGGAAGATTCTGTCATCAATAGCAACATTCAGGATTCTTCAAGGGCCTATTTATAGTCTTCCTGATTTAATTTCAATGACAGCAAAAACTAAAGTTTCTCTTGATAGGATCGCGTCGTTCCTTCATCTTGATGACTTGCAGTCTGATGTTGTCGAAAAGCTTCCTCCGGGTAGTTCTGATACTTCAATTGAAGTGGTTGATGGGAATTTTTCTTGGGATTTATCCTCACCTAATCCAACTTTGCAGAACATAAACCTCAAAGTTTTTCATGGCATGAAGGTTGCTGTTTGTGGTACAGTTGGATCGGGCAAGTCTACTTTACTTTCATGTGTATTGGGAGAACTACCAAAGATATCAGGTATCCTTAAAGTTTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATTCAAAGTGGGAAGATAGAAGATAATATATTGTTTGGTGAACACATGGTTAGGGAAAGGTATGAGAAGGTACTTGAAGCATGTTCCCTGAAGAAGGATCTGGAAATCTTGCCATTTGGTGATCAGACGGTTATAGGCGAGCGTGGAACTAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGTGCTCTTTATCGAGATGCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCATCTTTTTAAGGAATGTTTGCTGGGTGTTTTAAGTTCAAAAACAGTGATTTATGTTACTCATCAAGTGGAGTTTTTACCTACTGCTGATCTTATTTTGGTCATGAAAGATGGAAAAATTACTCAAAGCGGAAAGTATGACGAGCTTCTTAATATTGGAACCGATTTTATGGAACTTGTTGGGGCACACAGAGAAGCTTTGTCTACACTTGAATCATTGGATGGAGGAAAAACCTCAAATGAAATTAGTACATTAGAAGAAGATGTAAATATCTCTGGCACTCATGAAGAGGCAAACAAAGAAGTGCAAAATGGTAATGCAAATGATAAAGGCGAACCGAAAGGCCAAATTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTCAGTCTATTGGAAGTATATCACAACTGCATATGGAGGAGCTTTCGTACTGTTCATATTATTGGCTCAGATTCTTTTTCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGTGTGGGAAACTCCCATCTCAGCAGATGTGAAGCCACCTGTTGAAGAAACAACTCTTATTGAAGTCTATGTCGTTTTGGCCATTGGAAGTTCTTTATGCATTCTTGTTATAGAATTGTTACTTGTTACAGTTGGTTATAAGACAGCTACTATACTCTTCAATAAAATGCACTTGTGCATCTTTCGCGCCCCCATGTCATTTTTCGATTCTACTCCAAGTGGACGAATCCTTAATAGAGCTTCTACTGACCAAAGTGCAGTGGATGCCGACATTCCTTATAAAATTGGCGCATTTGCCTTTAATGTGATCATGCTTCTGGGAATTATAGCAGTGATGTCTCATGTTGCATGGCAAGTTTTCATTGTCTTTGTACCTGTGATAGCAGTCAGCATTTGGTATCAGCGATATTATTTACCATCAGGCCGTGAACTGTCACGTTTAGTTGGAGTATCCAGAGCCCCAATCATTCAACACTTTGCGGAAACAATTTCCGGTACTTCAACCATTAGAAGCTTTGATCAACAGTCAAGATTTCTTGAAACAAATATGAAACTGGTTGATGGGTATTCTCGACCAAAGTTCAACATGGCTGTTGCTATCGAATGGTTAGGTCTCCGCTTAGATATATTGTCTTCCATCACATTTGCCTTTTCCTTGATATTCTTGATATCAATCCCACCTGGAATCATAAATCCAGGCATTGCTGGTCTAGCTGTTACCTATGGTCTAAGTATAAACGCGATAACATATACGGTGATATGGAGTCTTTGCAACTTGGAGAACAACATTATATCGGTAGAAAGGATACTTCAACATACAACCATTCCTAGTGAGCCTCCCCTTGTTTCAGAAGAAGAAAATAGGCCAGATCCTTCTTGGCCCGCATATGGCAAGGTTGATATACGGAACTTGCAGGTTCGATATGCTCCACATCTTCCACTCGTGTTGCATGGCCTGACATGCACATTTCATGGAGGATTGAAAACTGGCATTGTTGGTAGAACAGGTAGTGGCAAATCAACTCTTATGCAAACACTTTTCCGACTCATTGAACCTACTGCTGGGGAAGTTATCATTGACCGCATCAACATCTCTACAATCGGACTGCATGACTTGAGGTCTCGACTAAGCATTATTCCGCAAGATCCAACAATGTTTGAGGGGACAGTGAGAAGTAATCTGGACCCCCTTGAAGAGTACACTGATGAACAAATTTGGGAGGCCTTGGATAAGTGTCAACTAGGAGATGAAGTTAGAAAGAAAGAAGGAAGGCTCGACTCTTCAGTCAGTGAAAATGGTGAGAATTGGAGCATGGGTCAGAGGCAGTTGGTTTGCCTAGGTAGGGTTCTGCTTAAGAAGAGCAAGATTTTGGTGCTTGACGAAGCCACTGCATCAGTTGATACAGCTACAGATAATTTGATTCAACAAACTCTTAGGCAGCATTTCACGGACTCTACCGTCATTACCATTGCACATCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTACTTCTTAGTCAAGGACTTATTGAGGAGTATGACTCCCCAACCACATTGCTTGAGGATAAGTCATCATCTTTTGGTAAGCTTGTTGCAGAGTATACCATGAGGTCCAACTCAAAATTTTGA 4458 0.3843 MNLETEFLQKPIFLHGLSIILHILLLLAILVSWVWKKIKTCAVINECNETPNSTSNWFNVTKFCCIAFSSFNFVLFLFDYWYTSVWSEENVVTLFDLVLKTVTWCVVCVCIHKGFFFLFSSDQRKRRFPLFFRVWCVFYLFVSCYWFVTDIVVLYENHIELRVQCMVSVVVSFCVSLLFFYVGYCVKNEGDRTLQEPLLNGNYGNALELRETKGSDTVTPYSNAGILSLLTLSWVGPLIAFGNKKTLDLEDLPQLDSRDSAAGAFPIFRDKVEADCGAINRVTTLKLVKLLIILGWKEILITGFLALINTCASYVGPYLIDSFVQYLGGKRLYENQGYVLVSAFIFSQLVKCLSQKHWYFKLKQHGVRIRALLVTMIYEKTLTLSCQSRQCHTSGEITNFITVDVERVGFFTWYMHDGWIVVLEVTLALLILYKNVGLASIASLVTTIIVMLANVPLGSLQGKFQKKLMDSKDTRMKSTSETLRNMRILKLQGWEMKFLSKIIELRDAEQGWLKKSLYTSAMTQFFYYGASTVISVVTFGTCMLIGIPLESGKILSSIATFRILQGPIYSLPDLISMTAKTKVSLDRIASFLHLDDLQSDVVEKLPPGSSDTSIEVVDGNFSWDLSSPNPTLQNINLKVFHGMKVAVCGTVGSGKSTLLSCVLGELPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGEHMVRERYEKVLEACSLKKDLEILPFGDQTVIGERGTNLSGGQKQRIQIARALYRDADIYLFDDPFSAVDAHTGSHLFKECLLGVLSSKTVIYVTHQVEFLPTADLILVMKDGKITQSGKYDELLNIGTDFMELVGAHREALSTLESLDGGKTSNEISTLEEDVNISGTHEEANKEVQNGNANDKGEPKGQIVQEEEREKGKVGFSVYWKYITTAYGGAFVLFILLAQILFQVLQIGSNYWMVWETPISADVKPPVEETTLIEVYVVLAIGSSLCILVIELLLVTVGYKTATILFNKMHLCIFRAPMSFFDSTPSGRILNRASTDQSAVDADIPYKIGAFAFNVIMLLGIIAVMSHVAWQVFIVFVPVIAVSIWYQRYYLPSGRELSRLVGVSRAPIIQHFAETISGTSTIRSFDQQSRFLETNMKLVDGYSRPKFNMAVAIEWLGLRLDILSSITFAFSLIFLISIPPGIINPGIAGLAVTYGLSINAITYTVIWSLCNLENNIISVERILQHTTIPSEPPLVSEEENRPDPSWPAYGKVDIRNLQVRYAPHLPLVLHGLTCTFHGGLKTGIVGRTGSGKSTLMQTLFRLIEPTAGEVIIDRINISTIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGRLDSSVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDSPTTLLEDKSSSFGKLVAEYTMRSNSKF* 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3522 1485 CDD ABCC_MRP_domain1 614 814 - -
Tpr6g3522 1485 CDD ABC_6TM_ABCC_D1 301 588 IPR044746 GO:0140359
Tpr6g3522 1485 Gene3D ABC transporter type 1, transmembrane domain 280 595 IPR036640 GO:0005524|GO:0016021
Tpr6g3522 1485 Gene3D ABC transporter type 1, transmembrane domain 884 1220 IPR036640 GO:0005524|GO:0016021
Tpr6g3522 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1243 1475 IPR003439 GO:0005524
Tpr6g3522 1485 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 922 1203 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr6g3522 1485 SUPERFAMILY ABC transporter transmembrane region 920 1222 IPR036640 GO:0005524|GO:0016021
Tpr6g3522 1485 CDD ABC_6TM_ABCC_D2 921 1213 IPR044726 GO:0140359
Tpr6g3522 1485 Pfam ABC transporter 1258 1406 IPR003439 GO:0005524
Tpr6g3522 1485 Pfam ABC transporter 632 766 IPR003439 GO:0005524
Tpr6g3522 1485 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 300 580 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr6g3522 1485 SUPERFAMILY ABC transporter transmembrane region 296 593 IPR036640 GO:0005524|GO:0016021
Tpr6g3522 1485 Gene3D - 1223 1476 IPR027417 -
Tpr6g3522 1485 SMART AAA_5 641 814 IPR003593 -
Tpr6g3522 1485 SMART AAA_5 1267 1459 IPR003593 -
Tpr6g3522 1485 Gene3D - 596 851 IPR027417 -
Tpr6g3522 1485 ProSitePatterns ABC transporters family signature. 739 753 IPR017871 GO:0005524
Tpr6g3522 1485 CDD ABCC_MRP_domain2 1239 1459 - -
Tpr6g3522 1485 Pfam ABC transporter transmembrane region 924 1165 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr6g3522 1485 Pfam ABC transporter transmembrane region 300 567 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr6g3522 1485 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 102 1485 - -
Tpr6g3522 1485 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 102 1485 - -
Tpr6g3522 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 836 IPR027417 -
Tpr6g3522 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1233 1466 IPR027417 -
Tpr6g3522 1485 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 614 837 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3522 Tpr-Chr6 38171100 38177556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3522 624 830 Calmodulin-binding Proteins AT2G36910 33.921 2.28e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3522 - K05666 gmx:100777836 2243.39