Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3509 ATGGTTTTTCAATGTCTCAAATGGTTCCTGCTGTTTATGTATTTTGGAGATTCACTTGTAGATGTTGGAAACAACAATTACTTGACTCTTTCTATTGCTAAGGCTAATCATCGTCATTATGGTATTGATTTTCTTGATCATAAACCAACTGGGAGATTTAGCAACGGCAAAAATGCTGCAGATTTTATTGGTGAGAAATTGGGTTTGGCAACTTCACCACCTTACCTCTTTTTAACATCAAAGGCCAACAAAAATGAGAAAAATGTATCCTTCATCAATGGTGTTAGCTTTGCCTCCGCAGGTGCTGGGATATTTGATGGTACAGATGAACGTTATGGTTTTAGAAAAATTGATCCTGATAAATGGGAGTTTGCAAATGAAGGATTTTTGAGAGGTTATAAACATCTTTTATCAAACATTAAGAGAAGGAGACAAACTTCATCACAACCTAGTACTTCACAAACACATTCACAAGGTCATTGTGTTGAAGTTGGTCGTTTTGGATTAGATGAAGAAATCGATCATTTGAGACGTGACAAACAAGTGTTAATGATGGAACTTGTGAAGCTTAGACAGCAACAACAGAACACAAGATCATTACTTCAAGCAATGGAGGAAAGGTTGCGCGGAACCGAAATTAAGCAGCAACAAATGATGGCTTTTTTAGCTAGAGCTATGAAGAATCCAGCTTTTATTCAGCAATTACTTCAACATAAGGAAAAGAGAAAGGAGATTGAAGAAGCTATTACTAAGAAGAGGAGAAGGCCAATTGAGTATGGAGAATCAAGCAATGATGTTAAATATGGATTTGAAGTGTCTGAGTTGGAGGTTCTTGCTATGGAAATGCAGGGTCTTGGAAGAGGTTTTGCAGCAGTTGATTGGACAAGAACCTCTGATAGTTGA 903 0.371 MVFQCLKWFLLFMYFGDSLVDVGNNNYLTLSIAKANHRHYGIDFLDHKPTGRFSNGKNAADFIGEKLGLATSPPYLFLTSKANKNEKNVSFINGVSFASAGAGIFDGTDERYGFRKIDPDKWEFANEGFLRGYKHLLSNIKRRRQTSSQPSTSQTHSQGHCVEVGRFGLDEEIDHLRRDKQVLMMELVKLRQQQQNTRSLLQAMEERLRGTEIKQQQMMAFLARAMKNPAFIQQLLQHKEKRKEIEEAITKKRRRPIEYGESSNDVKYGFEVSELEVLAMEMQGLGRGFAAVDWTRTSDS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3509 300 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 112 267 IPR027725 -
Tpr6g3509 300 SMART hsfneu3 72 143 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tpr6g3509 300 Pfam GDSL-like Lipase/Acylhydrolase 14 106 IPR001087 GO:0016788
Tpr6g3509 300 Coils Coil 235 255 - -
Tpr6g3509 300 SUPERFAMILY "Winged helix" DNA-binding domain 112 143 IPR036390 -
Tpr6g3509 300 Coils Coil 173 207 - -
Tpr6g3509 300 Gene3D SGNH hydrolase 11 159 IPR036514 -
Tpr6g3509 300 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 112 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3509 Tpr-Chr6 38013194 38019483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3509 112 291 HSF AT3G22830 56.481 2.59e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3509 K09419 - gmx:100811798 266.544