Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3504 ATGAGTTTGGATAAGAATCCGTGTGTATTTTTCGATGTATTAATTGATGGGGATCCCATTGAAAGAATTGTTATTGAGCTTTTTTCTAGCATAGTTCCTAAGACAGCGGAGAATTTTCGGGCACTTTGTACAGGCGAGAAGGGGATTGGAGAAGCAACCGGGAAACCTTTGCATTATAAAGGAACATGTTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAATGGGCAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCAGATGAAAATTTCAAACTAAAACATGACGGACCTGGTGTCCTTTCTATGGCTAATTCTGGTCCTAACACCAATGGATCTCAGTTTTTTATTATATTCAAGCGCCAGCCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTACTAAGGGAATAGAGATTCTGAAGAAAATGGAGCAGTTGGGAACGGGGGACGGGAAACCTACCCAGCCAATTAAAATTGTTGATTGTGGTGAAGTCTCTAAAGCAAAAACTCAGCATACTGTTGAAAAGGAGAAAGGGAAAAGGAGTAAGTCAGCGAAATCCTTAACTTCTGACGATAGTTCTGATGCTGGCAAAAAGTTAAGTAGAAAAAGAAAAACATCTTCCAAAGACAGGAAGAAGAGAAGGAAGAGATACTCATCGTCTGATAGTGACAGTGATAGTTATTCGTCAGATTCGGAATCAGATTCCGAATCAGATTCACCTTATTCTGATTCAAGTTCTTCTAGCTATGGGAAACACCAGAAGAGAAAAAGAAGTAAACGCGGACATGGGAAGAAGAGAAGTATTGGACGTAAGCAGAGAAGAAGCAAGCACAGTCATAGAAGATCAAGACACAAGTCCAAAAGGAGTTCTGAAGGTTCAAGTGATACAGAAAGTGACAGTTCTAGTGCTAGTGATAGTAGTTCTGGTGATAAGAAAGCTGATCGTCATGTCTCTGGTCGTAAAAAACAAGCTGACAACAAAACTAAAAAAAACCTAGGCACAGAAAAGCAATCTCCTAGCCTTCCGTTACAAAGTCCAACCAGTCCAGAACTAGAGGTGGATCCCAAGGTTAGAACGACTGTGGAAAAGCAATCACACGAAGAAGGTGAATTGTCTCCAGAAAATGGTGAATTTCTGAATAACGGGCATGATACTCAAGCTGAATTTAATAAGCCAACTAATCAACGGACTTATTCAGATGATTCAAATCACAATAGAGATACGAGTCCTGGAAGAAGTCCTGCTAGGAGTCCTACCAAGAATTCTAGAGAGCTGAACCAAGGACGTGCTCTATTGGCTAGTCCTGACCATAAAGCATCTGAACCTGCTGCCTCCAAACATGGCCGGGGAAATTCAAAAAGCCCTTCTCCAAATGGTACGCCAAAGCGCGTTAAAAAAGGACGAGGCTTTACTGAGCGCTTTGCCTTTGTACGCAGATATCGTACTCCATCTCCAGTGCAGTCTCCTCGTTCATATCGTTATGGGGATAGAAATATTAGAAGGAACTTTGATAGAAATACAAGCTACAGAAGCTATTCTGAGCGCTCGCCACCACGACGTTTTCGCAGCCCACCAAGGGGCAGCCGTCCCAGATACCAAAGCAGAAGAAGTCGGAGCAGGAGCAGGAGCATCTCCCGCAGTCCAGTACGTGGCCGTTATAGAGATAATGGCCGTGGCCGGAGTCCAATACGCAGCGTTAGCCCGGAAGGAAGGCGACCTCCCATAAGTGACAAATTAAAATCTCGACTTGGTGCTCGAGGTAGTCAACAATCTCCCGACAGAGCGAGGTCAAAGTCAAATTCGAGAAGCAAGGGCTCTTCTCGTTCCAGATCCCCTGATGCTATACCCCCAAGACGTTATGATAAAAGGACTTCCGTATCTCGCAGCAGGTCCAGATCAAGCTCACCTGGACACAAAGGTTTGGTTTCCTATGGAGATGCTAGTCCCGATTCAGGGGCTAGGTAG 1998 0.4359 MSLDKNPCVFFDVLIDGDPIERIVIELFSSIVPKTAENFRALCTGEKGIGEATGKPLHYKGTCFHRIIKGFMAQGGDFSMGNGTGGESIYGGKFADENFKLKHDGPGVLSMANSGPNTNGSQFFIIFKRQPHLDGKHVVFGKVTKGIEILKKMEQLGTGDGKPTQPIKIVDCGEVSKAKTQHTVEKEKGKRSKSAKSLTSDDSSDAGKKLSRKRKTSSKDRKKRRKRYSSSDSDSDSYSSDSESDSESDSPYSDSSSSSYGKHQKRKRSKRGHGKKRSIGRKQRRSKHSHRRSRHKSKRSSEGSSDTESDSSSASDSSSGDKKADRHVSGRKKQADNKTKKNLGTEKQSPSLPLQSPTSPELEVDPKVRTTVEKQSHEEGELSPENGEFLNNGHDTQAEFNKPTNQRTYSDDSNHNRDTSPGRSPARSPTKNSRELNQGRALLASPDHKASEPAASKHGRGNSKSPSPNGTPKRVKKGRGFTERFAFVRRYRTPSPVQSPRSYRYGDRNIRRNFDRNTSYRSYSERSPPRRFRSPPRGSRPRYQSRRSRSRSRSISRSPVRGRYRDNGRGRSPIRSVSPEGRRPPISDKLKSRLGARGSQQSPDRARSKSNSRSKGSSRSRSPDAIPPRRYDKRTSVSRSRSRSSSPGHKGLVSYGDASPDSGAR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3504 665 MobiDBLite consensus disorder prediction 533 558 - -
Tpr6g3504 665 Gene3D - 1 182 IPR029000 -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 262 298 - -
Tpr6g3504 665 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 408 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 244 259 - -
Tpr6g3504 665 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Tpr6g3504 665 MobiDBLite consensus disorder prediction 177 665 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 389 410 - -
Tpr6g3504 665 CDD cyclophilin_ABH_like 7 173 - -
Tpr6g3504 665 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 173 IPR002130 GO:0000413|GO:0003755
Tpr6g3504 665 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Tpr6g3504 665 MobiDBLite consensus disorder prediction 319 343 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 625 639 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 594 621 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 178 211 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 344 358 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 505 519 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 212 226 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 419 439 - -
Tpr6g3504 665 MobiDBLite consensus disorder prediction 366 384 - -
Tpr6g3504 665 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 408 - -
Tpr6g3504 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Tpr6g3504 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Tpr6g3504 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Tpr6g3504 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Tpr6g3504 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Tpr6g3504 665 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3504 Tpr-Chr6 37936228 37942331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3504 25 171 U-box Gene Family AT5G67530 48.993 3.90e-34 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3504 K09566 - gmx:100791082 753.436