Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3503 ATGGGAAAAAAGGATCGAAAGATCCAGAAACATCTTCAAAACCAAATGGGATGCATGTCAGGTTTCTTACATATCTTCGATCGCCATCAATTATTCCCCGGAAAACGCATCTACACCGTTAAAACACTCCCTTCCCCAAAATCAACGGAACCGGAAACAAACGGTAACTCACCAGCTGAATCAGAATCAACACCAGAAACAACCCAAACACCACAACCAGAAAAACCGTCTCAACCGGTTCACCGAGTTTTTGATTTCAAAGAAGGAACAAGATCTCCATGGAAATTCACCAGAGAAGCACCAAGACTATCATTAGACAGCAGAGCAGTTATAGATGCAAAAGGAACTATTCAAATTCACTCAAAAGATGAAGAAAAACGACGTCGTTCGACTTCAACTAGCGTCGTTGCAAAACTCATGGGTCTTGAAGACTCTGATCCCAACCCTAAGCTCCAAAAATCTGCTTCGGAATCAAGAGCTCACAGAGATCTATCACAACAACAACAGTATCGTTTCTTTGACAGTACAAATTTCCAGTTAAAGCAATTCGAAAATGCTTCATCGTTTTCATCGTTAAACAACAGTGTTTCAGATCTAAACATGAAAACAGAACAAGTCAGAGGAATTACAACGAAACAAAGGAAGATTTTCTATGATTCTGCAGACTTTTTTCCTGGTCCGAAACAGAGTACTGTTTCTGTTTCTGTTCAAGGTGAGATTGAAAAAAGGTTGAAGATGCGTGGGATTCATGAACCTTCTAAAGATCTTGATACATTGAAACAAATTCTTGAAGCTTTGCAGCTTAAAGGTCTCTTACATACCAAGAAATTAACAAATCATAGAAACTTTGTAATCGAGAATGTGAATGATTCTCATTCTCCGATTGTGGTTATGAAACCAGGAAGATCAATTAACCGAACCGGTTCGAGTTGGACCGGTTACGATTCTCCACCACCAGCTTCGACTTTCCGGTCCAAGGTTAAAACTCGTCCGGATCACATTCAATCACAGATCAAAAATAGAAACCACGTGAACTCCCCCACGCGCACTCCTAATTGCGTGAGAAAGGTTACTCCGGTTCATTCCTCGAGAAATGAACCGGACCGGAAAACACCGAACCGGTCACCAAAGATGAGAAAGAAGACGGTAACAGAAGATGAATCTTCAACCGTTTCTGATAGCTCTTCACATACCGATACAGAGAGGTTGATTAAGGAGCAATACAGAGAAGGGAAGGAATTACTGCAGAGGTGTGATAAGTTACTGAACAGTATAGCGGAAATAACTGAGTTACAACAACCGAGTCCAGTATCGGTACTTGACTCGTCGTTTTACAAGGATGACTCGTCGTGTTCACCGTCACCGGTAATGAAACGATGCATTGAATATAAAGATCTAGGAGCAGAGTCAGAAGATGAAACATGGAGTGTGGCAACATTGTATTGCAATGATGCCAAGTCAGAGGATTGCGATTTCATATACATTTCGGAAGTACTACGTGCTTCTAATTACTTGCCGGAAGACAATGACATGTTCTTGTTACTAGAACAACAACAGTACCTTAAGGGAAACGACACTTCCAAAGTTTCCACTCTTCAAAGACGATTAATCTTCGACACAATACATGAGATCCTCAACCGTAAACGCCGTTTGCCACCATGGAAGTTGGAGATAACGCCATCATTAAATCTGACTTGGTCAGAATTTCGGAGGATCCAAGAAAGAGAGGAATCGGAGGACATGTTCGAGGTTATATGTGGAGTGTTGAGAAAGGACATGTGTGGAGAGAATGAATGGGGTGAATGCGACGTGGAAATTGGAGATGTTGTGTTGGCCGTCGAACGGTTCATATTCAAAGATCTTATCGAAGAAACCATTAGAGATTTAGCGTTGTGTAATAAGGTACCACGTAACAAAGTTTCGATGCTCCGTAGGAAGCTAGAGTTTTAA 1950 0.4133 MGKKDRKIQKHLQNQMGCMSGFLHIFDRHQLFPGKRIYTVKTLPSPKSTEPETNGNSPAESESTPETTQTPQPEKPSQPVHRVFDFKEGTRSPWKFTREAPRLSLDSRAVIDAKGTIQIHSKDEEKRRRSTSTSVVAKLMGLEDSDPNPKLQKSASESRAHRDLSQQQQYRFFDSTNFQLKQFENASSFSSLNNSVSDLNMKTEQVRGITTKQRKIFYDSADFFPGPKQSTVSVSVQGEIEKRLKMRGIHEPSKDLDTLKQILEALQLKGLLHTKKLTNHRNFVIENVNDSHSPIVVMKPGRSINRTGSSWTGYDSPPPASTFRSKVKTRPDHIQSQIKNRNHVNSPTRTPNCVRKVTPVHSSRNEPDRKTPNRSPKMRKKTVTEDESSTVSDSSSHTDTERLIKEQYREGKELLQRCDKLLNSIAEITELQQPSPVSVLDSSFYKDDSSCSPSPVMKRCIEYKDLGAESEDETWSVATLYCNDAKSEDCDFIYISEVLRASNYLPEDNDMFLLLEQQQYLKGNDTSKVSTLQRRLIFDTIHEILNRKRRLPPWKLEITPSLNLTWSEFRRIQEREESEDMFEVICGVLRKDMCGENEWGECDVEIGDVVLAVERFIFKDLIEETIRDLALCNKVPRNKVSMLRRKLEF* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3503 649 MobiDBLite consensus disorder prediction 308 402 - -
Tpr6g3503 649 MobiDBLite consensus disorder prediction 139 164 - -
Tpr6g3503 649 PANTHER OS11G0587300 PROTEIN 5 649 - -
Tpr6g3503 649 PANTHER LONGIFOLIA PROTEIN 5 649 IPR033334 GO:0051513
Tpr6g3503 649 MobiDBLite consensus disorder prediction 361 387 - -
Tpr6g3503 649 Pfam Domain of unknown function (DUF4378) 491 624 IPR025486 -
Tpr6g3503 649 MobiDBLite consensus disorder prediction 42 76 - -
Tpr6g3503 649 MobiDBLite consensus disorder prediction 42 88 - -
Tpr6g3503 649 MobiDBLite consensus disorder prediction 338 359 - -
Tpr6g3503 649 MobiDBLite consensus disorder prediction 308 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3503 Tpr-Chr6 37902365 37909199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3503 59 649 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 37.643 2.55e-102 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3503 - - lja:Lj1g3v4449210.1 617.846