Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3498 ATGGCACCAGCAAATTCAACTGCTTTAAAATTTTCAATACTCCTAATTATACTAGCATTTGAATCTAGAGAGGCAAATATTTTTAATCCTACGATAACAGTAAGTATCAAGAATGTCATAGTGGTACCTGGAGATCGCGGCACAAGTATCACTGTTCATTGCAAATCCAAAGATGATGATCTTGGATTTCACACAATCAGATTTGGAGATCTTTACAGTTTTTCATTCCATGACAATGCTTTTGGTGGTACATTATTTTTCTGCAGTTTTACATGGCCTGAAGACCCTCGTCGTCATTATCTTGACATTTACAATCAAAGAGAAGACAATTGTCAAAAATGCAATTGGATAATAAACCAAAACGGTGGTTGTTTGAACTCCCATGGATGTGGTGATTGGAAAAGTATCGAATAA 414 0.3551 MAPANSTALKFSILLIILAFESREANIFNPTITVSIKNVIVVPGDRGTSITVHCKSKDDDLGFHTIRFGDLYSFSFHDNAFGGTLFFCSFTWPEDPRRHYLDIYNQREDNCQKCNWIINQNGGCLNSHGCGDWKSIE* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3498 137 PANTHER - 8 133 IPR010264 -
Tpr6g3498 137 Pfam Plant self-incompatibility protein S1 33 128 IPR010264 -
Tpr6g3498 137 PANTHER S-PROTEIN HOMOLOG 18-RELATED 8 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3498 Tpr-Chr6 37866918 37867331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3498 14 124 Carbohydrate Esterase AT3G16970 34.426 1.81e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3498 - - mtr:MTR_7g055907 135.576