Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3497 ATGGAATCGCACGGCGGAGGACCACTCCGTTCACGGAGTTCACAGTCCGCCTCTCCTTCTCACTCTGCCTCTGCCTCCGCCACCTCTTCCATCCACAAACGCAAACTCGTATCCGAAGATCACGCGCCTCCATTCCCTCCTTCTTCCTTATCCGCCGACACTCGCGACGGCGCACTCACTTCCAACGACGACCTCGAAAGCATTTCCGCCCGCGGCAATGACTCTGATTCCGACGACGATTCCGAGGATGCAGTTGTTGATGACGACGAAGATGAGTACGACAATGACAACGGTTCCTCCATGCGTAATTTCACTGCTTCTAGGCTAAATAACGCTCCTTCCGCTCCTCGTAACAGTAAGCTCAAAACTGAAAACTCTACTGTTAAGATTGAACAATCTGATGTGGCAAAAGATGCCGGACCTACCGTTACCGGTGCTTCTGCTGGTGGCGGTTCCGTCCCCGGCATTGTAGTTAAGGAGGATGCAACGAAGATATTCACTGAAAATTTGCAGACTAGTGGTGCTTACAGTGCTAGGGAAGAGAGTCTTAAGAAAGAGGAAGAAACTGGAAAGCTCAAATTTGCATGCCTTTCGAATGATGGTGTCGACGAGCATATGGTTTGGTTGATAGGATTGAAGAATATATTTGCTAGACAACTTCCCAATATGCCCAAGGAGTATATTGTTCGACTTGTTATGGATAGGAGCCATAAGTCTGTAATGGTTATAAGGCGTAATCATGTCGTTGGAGGCATTACATATCGCCCATATGCAAGCCAGAGGTTCGGTGAGATAGCCTTTTGTGCAATTACGGCTGATGAGCAAGTAAAAGGATATGGTACCAGATTGATGAATCACTTAAAACAGTATGCTCGCGATATAGATGGGCTGACCCATTTTCTCACATATGCTGACAATAATGCTGTTGGCTATTTTATCAAACAGGGATTTACTAAAGAGATTCATTTGGAGAAAGATCGATGGCAAGGTTACATAAAGGATTATGATGGGGGAATTCTCATGGAATGTAAGATTGATCCAAAGCTTCCTTACACTGATTTATCAACTATGATCCGTCGTCAAAGACAGAAAGAAGCTGGTATTCCTAAGAAAATTATTGATGACATCCCTGGTTTGCGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCGCGGTTCAGAACTTTAGGTGGTTCTACTGACAATGCTACAAACCTGAAACATTTAACCGTGCTTATGCGCTCACTTCTAAAGTCGATGCTTGATCACGCTGATGCTTGGCCATTCAAGGAACCTGTTGATGCACGGGATGTTCCTGATTATTATGAAATCATCAAAGATCCAATGGATCTGAAGACAATGAGTAAGAGGGTGGAATCAGAACAATATTATGTCACATTTGAGATGTTTGTTGAGGATGTCAAAAGAATGTTTTCGAATGCACGTACCTATAATTCTCCAGAAACCATATATTACAAATGTGCTACAAGACTAGAAGCCCACTTTGAAAGCAAAGTGACATCGTTCCTTCAGTCTGGCTCCAAAATTCAGTAA 1557 0.4438 MESHGGGPLRSRSSQSASPSHSASASATSSIHKRKLVSEDHAPPFPPSSLSADTRDGALTSNDDLESISARGNDSDSDDDSEDAVVDDDEDEYDNDNGSSMRNFTASRLNNAPSAPRNSKLKTENSTVKIEQSDVAKDAGPTVTGASAGGGSVPGIVVKEDATKIFTENLQTSGAYSAREESLKKEEETGKLKFACLSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQRFGEIAFCAITADEQVKGYGTRLMNHLKQYARDIDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQKEAGIPKKIIDDIPGLREAGWTPDQWGHSRFRTLGGSTDNATNLKHLTVLMRSLLKSMLDHADAWPFKEPVDARDVPDYYEIIKDPMDLKTMSKRVESEQYYVTFEMFVEDVKRMFSNARTYNSPETIYYKCATRLEAHFESKVTSFLQSGSKIQ* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3497 518 SMART bromo_6 403 512 IPR001487 GO:0005515
Tpr6g3497 518 Gene3D - 399 517 IPR036427 GO:0005515
Tpr6g3497 518 PANTHER BNAC04G26160D PROTEIN 364 518 - -
Tpr6g3497 518 PANTHER BNAC04G26160D PROTEIN 3 363 - -
Tpr6g3497 518 MobiDBLite consensus disorder prediction 53 68 - -
Tpr6g3497 518 MobiDBLite consensus disorder prediction 8 32 - -
Tpr6g3497 518 PANTHER GH11602P 3 363 IPR037800 GO:0004402
Tpr6g3497 518 PANTHER GH11602P 364 518 IPR037800 GO:0004402
Tpr6g3497 518 Pfam Acetyltransferase (GNAT) family 239 317 IPR000182 GO:0016407
Tpr6g3497 518 PRINTS Bromodomain signature 425 438 IPR001487 GO:0005515
Tpr6g3497 518 PRINTS Bromodomain signature 439 455 IPR001487 GO:0005515
Tpr6g3497 518 PRINTS Bromodomain signature 455 473 IPR001487 GO:0005515
Tpr6g3497 518 PRINTS Bromodomain signature 474 493 IPR001487 GO:0005515
Tpr6g3497 518 MobiDBLite consensus disorder prediction 76 95 - -
Tpr6g3497 518 CDD NAT_SF 239 293 - -
Tpr6g3497 518 MobiDBLite consensus disorder prediction 1 147 - -
Tpr6g3497 518 SUPERFAMILY Bromodomain 394 511 IPR036427 GO:0005515
Tpr6g3497 518 Gene3D - 188 352 - -
Tpr6g3497 518 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 204 351 IPR016181 -
Tpr6g3497 518 ProSiteProfiles Bromodomain profile. 422 493 IPR001487 GO:0005515
Tpr6g3497 518 Pfam Bromodomain 415 497 IPR001487 GO:0005515
Tpr6g3497 518 MobiDBLite consensus disorder prediction 98 132 - -
Tpr6g3497 518 CDD Bromo_gcn5_like 410 507 - -
Tpr6g3497 518 ProSitePatterns Bromodomain signature. 427 485 IPR018359 -
Tpr6g3497 518 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 199 346 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3497 Tpr-Chr6 37827195 37841250 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tpr6g3497 Bromodomain 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3497 K06062 - gmx:100813942 877.085